Candidatus Portiera aleyrodidarum TV-BCN: PTV_039
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Entry
PTV_039 CDS
T03736
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
plb
Candidatus Portiera aleyrodidarum TV-BCN
Pathway
plb03030
DNA replication
plb03430
Mismatch repair
plb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PTV_039 (holB)
03430 Mismatch repair
PTV_039 (holB)
03440 Homologous recombination
PTV_039 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plb03032
]
PTV_039 (holB)
03400 DNA repair and recombination proteins [BR:
plb03400
]
PTV_039 (holB)
Enzymes [BR:
plb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PTV_039 (holB)
DNA replication proteins [BR:
plb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PTV_039 (holB)
DNA repair and recombination proteins [BR:
plb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PTV_039 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-ProteinID:
CEI58996
LinkDB
All DBs
Position
I:41316..42308
Genome browser
AA seq
330 aa
AA seq
DB search
MNKTKVLLPWHKNKLKKFLFLIKKEIIPHALLLIGQPGIGKNKFAKLLISIILCSNFNKK
EDKINNYSCGSCNQCLMWINGYHPNIINISKYSIINIDSIRIINKFIETTPQYDGYRIIF
IKNASNMTIEATNALLKNIEEPGSLVLFILTSNVLLLPTMNSRCCKFVFKPIYNNFFLFW
VASHIYYSAESNLFLNITCNKPLLANNINYIINLRHILNIIFYNLINGAEPIKEIKKIKI
KNINLFLDFGISFIEDIIRLLSGIKNIKNYDIISLYINLIKKNILLNNCFKLLYITYKKR
KIFINNKNINNKLLLETWLINFIRNIFEEI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaacaaaggtattgttaccttggcataaaaataaattaaaaaaatttttattt
ttaataaaaaaagaaattattccacatgcattattattaataggacaaccaggtattgga
aaaaataaatttgctaaattattaatatcaattatattatgttctaactttaataaaaaa
gaagataaaataaataattatagttgtggaagttgtaatcaatgtttaatgtggattaat
ggatatcatcctaatattattaatataagtaaatattctattataaatattgattcaata
agaattatcaataagtttattgaaacaacaccacaatatgatggttatcgtattattttt
attaaaaatgcttctaatatgacaatagaagctactaatgctttattaaaaaatattgaa
gaacccggttcacttgttttatttatattaacttctaatgtattattattacctactatg
aatagtagatgttgtaaatttgtttttaaacctatatataacaatttctttttattttgg
gtagcttcacatatatattattcagcagaatcaaatttatttttaaatataacatgtaat
aaacctttattagctaataatataaattatataataaacttaagacacatattaaatatt
attttttataatttaataaatggggcagaacctattaaggaaataaaaaaaattaagata
aaaaatattaatctatttttggattttggtataagttttattgaagatataattagatta
ttatctggtataaaaaatataaaaaattatgatattatatcattatatataaatttaata
aaaaaaaatatattattaaataattgctttaaattattatatataacttataaaaaacgt
aaaatatttattaataataaaaatattaataataaattattattagaaacttggttaata
aattttataaggaatatttttgaagaaatttaa
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