Candidatus Portiera aleyrodidarum TV-BCN: PTV_171
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Entry
PTV_171 CDS
T03736
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
plb
Candidatus Portiera aleyrodidarum TV-BCN
Pathway
plb03030
DNA replication
plb03430
Mismatch repair
plb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PTV_171 (dnaX)
03430 Mismatch repair
PTV_171 (dnaX)
03440 Homologous recombination
PTV_171 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plb03032
]
PTV_171 (dnaX)
03400 DNA repair and recombination proteins [BR:
plb03400
]
PTV_171 (dnaX)
Enzymes [BR:
plb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PTV_171 (dnaX)
DNA replication proteins [BR:
plb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PTV_171 (dnaX)
DNA repair and recombination proteins [BR:
plb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PTV_171 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_14
AAA_5
AAA_22
AAA_18
PIF1
nSTAND3
TIP49
AAA_19
Rad17
AAA_30
ResIII
AAA_16
AAA_assoc_2
RCF1-5-like_lid
AAA_7
TsaE
Sigma54_activat
DUF7816
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CEI59135
LinkDB
All DBs
Position
I:complement(157010..158107)
Genome browser
AA seq
365 aa
AA seq
DB search
MRHVVLALKLRPKTLDELIGQKHVIKSLKNSIKNYRLHHAYLFTGTRGVGKTTIARIFAK
CLNCEKGIVINTCEKCKNCQLINIGNFSDLIEVDAASRTKVEETKKILEDIKYPPVIGRY
KIYLIDEVHMLSLYSFNALLKTLEEPPEYIKFLLATTNLKKIPITILSRCLQFNLKLIPI
KLMMKYLKKILFVEKLLIENSALKLICKVSKGSMRDALSLVEQSISFCGKKIKEKHIIKL
IGVINKNYIYLIVKALIQSDIDKVLKVIRNLYELGVDFIYICDELIILFHKIALSKIIPN
YFKLIKEEIDKELIYFSNKFTIDEINIYYKIILKGRKTMLVVPDLKSGLEMILLKIIFLK
KEVNI
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagacatgtagttttagctctcaaattaagacccaaaactttagatgagttaataggg
caaaaacatgtaataaaatctttaaaaaattctataaaaaattatagattacatcatgct
tatttatttacaggtactaggggtgttggaaaaacaacaatagcaagaatatttgcaaaa
tgtttaaactgtgaaaaagggatagtaatcaatacatgtgaaaaatgtaagaattgtcaa
ttaataaatataggaaactttagtgatttaatagaagtagatgctgcgtcacgtactaaa
gtggaagaaacaaaaaaaatattagaagatataaaatatcctcctgttataggtcgttat
aaaatatatttaatagatgaagtacatatgctttctttatatagttttaatgctttatta
aaaactttagaagaacctccagaatatataaaatttttattagcaacgactaatttaaaa
aaaataccaattacaattttatcaagatgtttacaatttaatttaaaactaatacctatt
aaattaatgatgaaatatttaaaaaaaatattatttgtcgaaaaactattaatagaaaat
agtgcattaaaattaatctgtaaagtttcaaaagggtctatgagagatgctttatcgtta
gtagaacaatctattagtttttgtggaaaaaaaataaaagaaaaacatataataaaattg
ataggagtaataaataaaaattatatatatttaatagtaaaagctttaatacaaagtgat
atagataaagtgttaaaagtaataagaaatttatatgagttaggagtagattttatatat
atatgtgatgaattaattattttatttcataaaatagctttatcaaaaataataccaaat
tattttaaattaataaaagaagagatagataaagaattaatttatttttctaataagttt
actatagacgaaataaatatatattataaaataatattaaaaggacgtaaaactatgtta
gtagtaccagatttgaaatcgggtttagaaatgattttattaaaaataatatttttaaaa
aaagaggttaatatatga
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