Candidatus Portiera aleyrodidarum AD-CAI: PAD_161
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Entry
PAD_161 CDS
T03737
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
plc
Candidatus Portiera aleyrodidarum AD-CAI
Brite
KEGG Orthology (KO) [BR:
plc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PAD_161 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plc03021
]
PAD_161 (rpoD)
Transcription machinery [BR:
plc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PAD_161 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
CEI58723
UniProt:
A0A8D9JVD1
LinkDB
All DBs
Position
I:complement(147487..149115)
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AA seq
542 aa
AA seq
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MFKEKGINLLDKLSEEDTLRYKNYNNIEETEELVSWNKESDIRNNDPVRIYMREMGNIEL
LNRKGEIEIAKKIEEGTKEIMAAIVYLPGAVDYIIEIYDLIKKESGENFYDLFTGFINLE
KKDIKKNNENSNNKTYQNEGPDPILTNIKFEKIRKQNKKVKKTMFKYGYKSKETKIELKL
LSNLFSHIKLLPKHFECLLNKVKFSIDNIRSQEKLILKYMVKYGNYSRKKFIDSFIGNET
NLNWLDKFIYKNSDKKNSIKKYRSEIVKAQKKILLEQQQINLSVGELKEINKKFLIGETK
AHKAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVEKFEYRKGYKFSTYA
TWWIRQAITRSIADQARTIRIPVHMIETINRLNRLSRKLLQERGREPTPEELSNRLEISE
KKIRKIMKIAKEPISIETPIGEDEDYYLSDFIEDNITASPIEAATDEGLVEATRNVLSEL
TAREAKVLRMRFGIDMNTDHTLEEVGKQFEVTRERIRQIEAKALRKLRHPSRSEALRSFI
EE
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagaaaaaggaattaatcttcttgataaattatctgaagaagatacattaaga
tataaaaattataataatattgaagaaacagaggaattagtttcttggaataaagaaagt
gatatacgtaataatgatcctgtacgaatatacatgagagaaatgggaaatatagaatta
ttaaatagaaaaggggaaatagaaatagcaaaaaaaatagaagaaggtactaaagaaatt
atggcagcaatagtttatttgccaggtgcagtagattatataatagaaatttatgattta
ataaaaaaagaatcaggggaaaatttttatgatttatttacaggttttataaatttagaa
aaaaaagatataaaaaaaaataatgaaaattctaataataaaacttatcagaatgaagga
ccagatccaatattaacaaatataaagtttgaaaaaattcgtaaacaaaataaaaaagta
aaaaaaaccatgtttaaatatggatataaatcaaaagaaacaaaaatagaattaaaattg
ctatctaatttattttcacatataaaattattaccaaaacattttgaatgtttattaaat
aaagttaaatttagtatagataatataagaagtcaagaaaaattaatattaaaatatatg
gtaaaatatggaaactactcaagaaaaaaatttatagatagttttataggtaatgaaact
aatttaaactggttagataaatttatatataagaattcagataaaaaaaatagtataaaa
aaatatagaagtgagattgttaaagcacaaaaaaaaattttattagaacaacaacaaata
aatttatctgttggtgaattaaaagaaataaacaaaaaatttttaataggagaaactaaa
gctcataaagcaaaaaaagaaatgattgaagcaaatttaagattagtaatatcaatagca
aaaaaatatacgaatcgtggtttacaatttttagatttaatacaagaagggaatataggt
ttaatgaaagcagttgagaaatttgaatatcgcaaaggctataaattttctacatatgct
acatggtggatacgtcaagctattactagatcaatagcagatcaggcaagaacaataaga
atcccagtacatatgatagaaacaataaatagattaaataggttatctagaaaactgttg
caggaaagaggtagagaacctacacctgaagagttaagcaatagactagaaatttcagaa
aaaaaaataagaaaaataatgaaaatagcaaaagaacctatatctatagaaacaccaata
ggcgaagatgaagattattatttaagtgattttatagaagataatataactgcatcacca
atagaagcagcgacagatgagggcttagtagaagcaacaagaaatgttttaagtgaatta
acagcgagagaagcaaaagttttacgaatgagatttggaatagatatgaatacagatcat
actttagaagaagttggcaaacaatttgaggtaactcgggaaagaattcgtcagatagaa
gcaaaagctttaagaaaattaagacatccttcacgctctgaagccttaaggtcatttatt
gaagaataa
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