Palleronia sp. LCG004: RVY76_00215
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Entry
RVY76_00215 CDS
T09465
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
plcg
Palleronia sp. LCG004
Pathway
plcg00550
Peptidoglycan biosynthesis
plcg01100
Metabolic pathways
plcg01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RVY76_00215 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RVY76_00215 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plcg01011
]
RVY76_00215 (mrdA)
Enzymes [BR:
plcg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RVY76_00215 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
plcg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RVY76_00215 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WOI56253
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All DBs
Position
complement(51882..53804)
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AA seq
640 aa
AA seq
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MKRTPRDTETSLRGISRRGLVLGGLQLGVAGVLGWRMRQMQVEQADQFRLLAEENRINMR
LIAPARGLIFDRNGIPLAENAQNYRIVIVREDAGDVDEVIARLGDLIYLDPVELERAKKE
IARRSPFVPVTLTDQRSWEDIAAVAVNAPALPGITPDVGLTRNYPLAEDHAHIIGYVGPV
SDYDLQRIDDDDPLLQIPKFQIGKTGVEQKYERDLRGKAGTRRIEVNAAGRVMRELGRDP
GIPGANIQLTVESRLQNFVEARLAPALSASAVVMDTRNGDLLAVGNAPSFDPNKFVRGIS
VADYGELTENIYRPLSNKAVQGAYPPGSTFKMMVSLAAMDAGQLNPGETFYCGGYHKLGN
RRFHCWKRGGHGWVDLEKSLEQSCDVYYYELAQRIGIDRIAETARRFGLGERFDLPMSAV
SPGAMPDRAWLQERYQQPWRVGDSLNASIGQGYVLSTPLQLAVMTARLASGTRIEPRLVK
SIDGVELEPRGLEPLGFSNEHLRIVRNGMDAVCNSRRGTAYGSRIEAGDMRMAGKTGTSQ
VRSVVVSNNDVPWEQRDHALYVGYAPFNNPHISVSVVVEHGGGGSSVAAPIARDILLYAL
HGKMPPVESYPSAQRGRIGQFLSELDLRQDFRPTERSGRA
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcacgccacgcgacaccgagacgagcctgcgcggcatctcccgacgggggctc
gtgctcggcggcctgcagctcggcgtggcaggggttctcgggtggcggatgcgccagatg
caggtcgagcaggccgaccagttccgcctgctggctgaggagaaccgcatcaacatgcgc
ctcatcgcgccggcgcggggcctgatcttcgatcgcaacggcatcccgctcgccgagaac
gcgcagaactaccgcatcgtcatcgtgcgcgaggatgcgggcgatgtcgacgaggtgatc
gcccggctgggggacctcatctatctcgacccggtcgagctcgagcgcgcgaagaaggaa
atcgcgcgccgctcgcccttcgtgcccgtcaccttgaccgatcagcgcagctgggaggac
atcgcagcagtcgcggtcaacgcccctgcccttccgggcatcacgcccgatgtgggcctt
acccggaactatccgctggccgaggatcacgcccatatcatcggctatgtcggcccggtc
agcgattacgaccttcagcggatcgacgacgacgatccattgctgcagatcccgaaattc
cagatcggcaagaccggggtcgagcagaagtacgagcgtgacttgcgcggcaaggcgggc
acgcgccgcatcgaggtcaacgccgccgggcgcgtcatgcgcgagctcggccgcgatccg
ggtattccgggcgcgaacatccagcttaccgtcgaaagccggctgcagaacttcgtcgag
gcccgcctcgcaccggccctgtcggcaagcgcggtggtgatggacacgcgtaacggagac
cttctggccgtcggcaacgcaccgtccttcgatcccaacaagttcgtgcgcggcatctcg
gtcgccgattacggcgagctgaccgagaacatctatcgcccgctgtcgaacaaggccgtg
cagggggcctatccgccgggatcgaccttcaagatgatggtcagcctcgccgcgatggat
gcgggtcagctgaaccccggcgagacgttctattgcggcggctaccacaagctgggcaac
cggcgctttcattgttggaagcgcggcggccatggctgggtcgatctcgagaagtcgctc
gagcaatcctgcgacgtttactactacgaactcgcccagcgcatcggcatcgacaggatc
gccgagaccgcgcgccgcttcggcctgggagagcggttcgatctgccgatgtcggccgtc
agccccggtgcgatgcccgaccgggcctggctccaggagcgctatcagcagccctggcgc
gtgggcgacagcctcaacgcctcgatcggccagggctacgtgctttcgacgccgctgcag
ctcgccgtgatgaccgcccggctcgcctcgggcacgcggatcgagccgcggctcgtcaag
tcgatcgatggggtggagctcgagccccgcggccttgagccgctgggcttctcgaacgag
catcttcgcatcgtccggaacggcatggacgcggtctgcaattcgcgccgcggcaccgcc
tacggctcgcgcatcgaggcgggggacatgcgcatggccggcaagacggggacgagccag
gtgcgcagcgtcgtcgtcagcaacaacgacgtcccctgggaacagcgcgaccatgcgctc
tatgtgggctacgcccccttcaacaacccgcatatctcggtctcggtcgtggtggagcat
ggcggcggcgggtcgtcggtcgcggcccccatcgcgcgcgacatccttctctatgcgctg
cacggcaagatgccaccggtcgaaagctatccatcggcgcagaggggccggatcggccag
ttcctgagcgaactcgacttgcggcaggatttccgccccaccgagcggagcggccgcgcg
tga
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