Palleronia sp. LCG004: RVY76_02270
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Entry
RVY76_02270 CDS
T09465
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
plcg
Palleronia sp. LCG004
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plcg03019
]
RVY76_02270 (rnc)
03009 Ribosome biogenesis [BR:
plcg03009
]
RVY76_02270 (rnc)
03036 Chromosome and associated proteins [BR:
plcg03036
]
RVY76_02270 (rnc)
Enzymes [BR:
plcg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RVY76_02270 (rnc)
Messenger RNA biogenesis [BR:
plcg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RVY76_02270 (rnc)
Ribosome biogenesis [BR:
plcg03009
]
Eukaryotic type
90S particles
RNase
RVY76_02270 (rnc)
Prokaryotic type
rRNA processing factors
RVY76_02270 (rnc)
Chromosome and associated proteins [BR:
plcg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RVY76_02270 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
WOI56647
LinkDB
All DBs
Position
469656..470336
Genome browser
AA seq
226 aa
AA seq
DB search
MKLSAEQKAFALRLGHEFDDPDLLIRSLTHGSIASASRPDNQRLEFLGDRVLGLVMAEAL
LEADPHAPEGHLAPRYNALVRKETCAEVARDADLGAVLRLGRSEMMSGGRRKEALLADAM
EAVIAAIYRDGGYLAAKRAVLRLWGDRIAKVDADSRDAKTALQEWAQARALNPPRYVETA
REGPDHAPRFTIEVRLETGETERAEGTNKRAAEQKAAQALLDRLGG
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctttcggccgagcagaaggcctttgccctgcggcttggccacgagttcgacgac
ccggatctcctgatccgttcgctgacgcacggctcgatcgcgtccgcctcgcggcccgac
aaccagcggctggaattcctgggcgaccgggttttgggcctcgtcatggccgaggcgctg
ctcgaggccgatccgcatgcccccgaggggcatctggctccccgctacaacgccctcgtg
cggaaggagacctgcgccgaggtggcgcgcgacgccgatctgggtgccgtgctgcggctc
ggaaggtccgagatgatgtcaggcggacgccggaaggaggcgctgctggccgatgcgatg
gaagcggtcatcgcggcgatctatcgcgacggcggctatctggcggcgaaacgcgccgtg
ctgcggctctggggcgaccggatcgccaaggtcgatgccgacagccgcgatgcgaagacc
gcgcttcaggaatgggcgcaggcgcgcgcgctgaacccgccccgctatgtcgagacggcg
cgcgaggggcccgaccacgccccgcgcttcacgatcgaggtccgcctcgagaccggcgag
accgagcgcgccgagggcacgaacaagcgcgcggccgaacagaaggcggcgcaggcgctg
ctcgaccggctcggggggtga
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