Palleronia sp. LCG004: RVY76_04710
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Entry
RVY76_04710 CDS
T09465
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
plcg
Palleronia sp. LCG004
Pathway
plcg03030
DNA replication
plcg03410
Base excision repair
plcg03420
Nucleotide excision repair
plcg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RVY76_04710 (polA)
03410 Base excision repair
RVY76_04710 (polA)
03420 Nucleotide excision repair
RVY76_04710 (polA)
03440 Homologous recombination
RVY76_04710 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plcg03032
]
RVY76_04710 (polA)
03400 DNA repair and recombination proteins [BR:
plcg03400
]
RVY76_04710 (polA)
Enzymes [BR:
plcg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RVY76_04710 (polA)
DNA replication proteins [BR:
plcg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RVY76_04710 (polA)
DNA repair and recombination proteins [BR:
plcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RVY76_04710 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RVY76_04710 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Taq-exonuc
HHH_5
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WOI57094
UniProt:
A0AAU0HSP4
LinkDB
All DBs
Position
969836..972631
Genome browser
AA seq
931 aa
AA seq
DB search
MAFGKGHHLHLVDGSAFIFRAYHALPPLTRKSDGLPVGAVSGFVNMIWKMIEDNRGPDAP
THAAVVFDKGSITFRNELYDQYKANREAMPEDLRPQIPLTRDATRAFNLACLEQEGFEAD
DIIATLAIRARDAGGRVTIISSDKDLMQLVGGGVEMFDAMKNVRIDAEGVHAKFGVGPDR
VVDVQALAGDSVDNVPGAPGIGIKTAALLINEFGSLEDLLERTDEVPQPKRRQTLIDHAD
QIRLSKTLVQLDCEMDLEYDLDSLEVKAPVADDLIAFLSEMEFRTIVKRVSDALGVEAPA
VTATAEQAPAPAEKAEQPPFPETYDWVRDEATLEAWIAKAHARGYVAVDTETTALNEMQA
LLVGVSLALAPGEACYIPLTHKENAEADLFATDALAEGQIAQDRALELLKPLFEDSSVLK
IGQNLKYDAKILARLGIGLAPIDDTMLMSYAMNAGLHNHGMDVLSERYLGHNPIPIKQLI
GSGKSQITFDKVPVDKAVTYAAEDADITLRLWQLFKPQLHRSRVTTVYETLERPLIPVLA
RMEMAGVEVDRETLSRMSGAFAQKMAALESEIHELAGGEFKVGSPKQLGEILFDKLGLPG
GKKGKTGAYGTGADILEDLATEHELPGKVLDWRQVSKLKSTYTDALQDHIDPETGRVHTS
YSIAGAATGRLASTDPNLQNIPIRTEEGRRIREAFVAPKGKTLVALDYSQIELRILAHMA
GIEELKQAFREGQDIHALTASEMFNVPMDEMTSEIRRQAKAINFGVIYGISGFGLARNLR
IPREEAQGFIDRYFERFPGIKDYMSETTAFAKEHGYVQTMFGRRINTPEINAKGPGAGFA
RRAAINAPIQGTAADVIRRAMIRMDDAIADLPARMLLQVHDELLFEVDEGHEAALIDRAR
DVMEGASLPAVHLSVPLEVDAGQGPNWASAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcggaaaaggacatcacctccacctggtcgacgggtcggccttcatcttccgc
gcctatcatgcgctgccgccgctcacgcgcaagtcggacggcctgccggtgggcgcggtg
tcgggcttcgtcaacatgatctggaagatgatcgaggacaatcgcggccccgacgcgccg
acccatgcggccgtggtcttcgacaaggggtcgatcaccttccgcaacgagctctacgat
cagtacaaggcaaatcgcgaggcgatgcccgaggatctgcgcccgcagatccccctgacg
cgggacgccacgcgcgccttcaacctcgcctgtctggagcaggaggggttcgaggccgac
gacatcatcgcgacgcttgcgatccgcgcccgcgacgccggcggccgcgtgacgatcatc
agctccgacaaggacctgatgcagctcgtgggcggcggggtcgagatgttcgacgcgatg
aagaacgtgcggatcgacgcggagggcgtgcacgccaagttcggcgtcggccccgatcgc
gtggtggacgttcaggcacttgcgggcgacagcgtcgacaatgtgccgggcgcgcccggc
atcggcatcaagacggctgcattgttgatcaacgaattcggtagcctggaggatcttctt
gagagaacggatgaggttccgcaacccaagcgccgccagaccctgatcgaccatgccgac
cagatccgcctgtcaaagacgttggtgcagctcgattgcgagatggatctggaatacgat
ctcgacagtcttgaggtgaaggccccggtggcggacgatctcatcgccttcctctccgag
atggagttccgcaccatcgtcaagcgcgtctcggatgccctgggcgtcgaggcacccgcc
gtgaccgccaccgccgagcaggccccggcccccgcggaaaaggccgaacagcctccgttc
ccagaaacctacgactgggtccgcgacgaggcgacgctcgaggcatggatcgcgaaggcc
catgcccgcggctatgtcgcggtcgatacggaaaccaccgcgctcaacgagatgcaggcc
cttttggtcggtgtgtcgctggccctcgccccgggcgaggcctgctatatcccgctgacc
cacaaggagaatgccgaggccgatctctttgcgacggatgcgctggccgaggggcagatc
gcccaggaccgcgcgctggaacttctcaagccgctcttcgaggattcgtcggtcctcaag
atcggacagaacctcaaatacgacgccaagatcctcgcacggctgggcatcggcctcgcg
ccgatcgacgacacgatgctgatgagctacgcaatgaatgcggggctgcacaatcacggc
atggacgtgctgtcggaacgctatctggggcacaacccgatcccgatcaaacagctcatc
gggtcgggcaagagccagatcaccttcgacaaggttccggtcgacaaagccgtgacctac
gcggccgaggacgcggatatcacgctgaggctctggcagctcttcaagccgcagctgcac
cgctcccgcgtcacgacggtctacgagacgctggagcgtccgctgatcccggttctggcc
cggatggaaatggccggtgtcgaggtcgatcgcgaaacgctgagccgcatgtcgggggct
ttcgcgcagaaaatggcagccctcgaatcagagatccacgagctcgccggcggggagttc
aaggtcggatcgcccaagcagctgggcgagatcctgttcgacaagctcggcctgccgggc
gggaagaagggcaagacgggagcttacgggaccggggccgacatcctcgaagacctcgcg
acggaacacgagctgcccggcaaggttctcgactggcggcaggtcagcaagctgaaatcg
acctatacggacgcgctgcaggaccatatcgaccccgagacggggcgcgttcacacgtcc
tattccatcgcgggtgccgcgaccggaaggctcgcatcgaccgatccgaacctgcagaac
atcccgatccgcaccgaggaggggcggcgcatccgcgaggcattcgtcgcgccgaaaggc
aagacgctggtggcgctcgactacagccagatcgagctcaggatcctggcccacatggcc
gggatcgaggagctgaagcaggccttccgcgaggggcaggacatccacgcgcttaccgcg
tccgagatgttcaacgtgcccatggacgagatgacgtccgagatccgccgacaggcgaag
gcgatcaatttcggcgtgatctacggcatttccggcttcgggctcgcccgcaacctccgc
atcccgcgcgaagaggcgcagggcttcatcgaccgctatttcgaacgcttccccggcatc
aaggactacatgtccgaaacgaccgccttcgccaaggaacacggctacgtccagaccatg
ttcggacgtcgcatcaacacgcccgagatcaacgcaaagggtccgggcgcgggattcgcg
cgccgtgccgcgatcaacgcccccattcagggcaccgcagccgacgtgatccgccgcgcg
atgatccgcatggacgacgcgatcgccgaccttcccgcgcggatgctgctgcaggtccat
gacgaacttctcttcgaggtggacgagggtcacgaggcggccctgatcgatcgcgcgcga
gacgtgatggagggtgcatcgttgccggccgtgcatctgagcgtcccgctcgaggtcgat
gcggggcagggtccgaactgggcctccgcccattga
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