KEGG   Palleronia sp. LCG004: RVY76_04710
Entry
RVY76_04710       CDS       T09465                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
plcg  Palleronia sp. LCG004
Pathway
plcg03030  DNA replication
plcg03410  Base excision repair
plcg03420  Nucleotide excision repair
plcg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:plcg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RVY76_04710 (polA)
   03410 Base excision repair
    RVY76_04710 (polA)
   03420 Nucleotide excision repair
    RVY76_04710 (polA)
   03440 Homologous recombination
    RVY76_04710 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:plcg03032]
    RVY76_04710 (polA)
   03400 DNA repair and recombination proteins [BR:plcg03400]
    RVY76_04710 (polA)
Enzymes [BR:plcg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RVY76_04710 (polA)
DNA replication proteins [BR:plcg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     RVY76_04710 (polA)
DNA repair and recombination proteins [BR:plcg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     RVY76_04710 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RVY76_04710 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc Taq-exonuc HHH_5 DNA_polI_exo1
Other DBs
NCBI-ProteinID: WOI57094
UniProt: A0AAU0HSP4
LinkDB
Position
969836..972631
AA seq 931 aa
MAFGKGHHLHLVDGSAFIFRAYHALPPLTRKSDGLPVGAVSGFVNMIWKMIEDNRGPDAP
THAAVVFDKGSITFRNELYDQYKANREAMPEDLRPQIPLTRDATRAFNLACLEQEGFEAD
DIIATLAIRARDAGGRVTIISSDKDLMQLVGGGVEMFDAMKNVRIDAEGVHAKFGVGPDR
VVDVQALAGDSVDNVPGAPGIGIKTAALLINEFGSLEDLLERTDEVPQPKRRQTLIDHAD
QIRLSKTLVQLDCEMDLEYDLDSLEVKAPVADDLIAFLSEMEFRTIVKRVSDALGVEAPA
VTATAEQAPAPAEKAEQPPFPETYDWVRDEATLEAWIAKAHARGYVAVDTETTALNEMQA
LLVGVSLALAPGEACYIPLTHKENAEADLFATDALAEGQIAQDRALELLKPLFEDSSVLK
IGQNLKYDAKILARLGIGLAPIDDTMLMSYAMNAGLHNHGMDVLSERYLGHNPIPIKQLI
GSGKSQITFDKVPVDKAVTYAAEDADITLRLWQLFKPQLHRSRVTTVYETLERPLIPVLA
RMEMAGVEVDRETLSRMSGAFAQKMAALESEIHELAGGEFKVGSPKQLGEILFDKLGLPG
GKKGKTGAYGTGADILEDLATEHELPGKVLDWRQVSKLKSTYTDALQDHIDPETGRVHTS
YSIAGAATGRLASTDPNLQNIPIRTEEGRRIREAFVAPKGKTLVALDYSQIELRILAHMA
GIEELKQAFREGQDIHALTASEMFNVPMDEMTSEIRRQAKAINFGVIYGISGFGLARNLR
IPREEAQGFIDRYFERFPGIKDYMSETTAFAKEHGYVQTMFGRRINTPEINAKGPGAGFA
RRAAINAPIQGTAADVIRRAMIRMDDAIADLPARMLLQVHDELLFEVDEGHEAALIDRAR
DVMEGASLPAVHLSVPLEVDAGQGPNWASAH
NT seq 2796 nt   +upstreamnt  +downstreamnt
atggcgttcggaaaaggacatcacctccacctggtcgacgggtcggccttcatcttccgc
gcctatcatgcgctgccgccgctcacgcgcaagtcggacggcctgccggtgggcgcggtg
tcgggcttcgtcaacatgatctggaagatgatcgaggacaatcgcggccccgacgcgccg
acccatgcggccgtggtcttcgacaaggggtcgatcaccttccgcaacgagctctacgat
cagtacaaggcaaatcgcgaggcgatgcccgaggatctgcgcccgcagatccccctgacg
cgggacgccacgcgcgccttcaacctcgcctgtctggagcaggaggggttcgaggccgac
gacatcatcgcgacgcttgcgatccgcgcccgcgacgccggcggccgcgtgacgatcatc
agctccgacaaggacctgatgcagctcgtgggcggcggggtcgagatgttcgacgcgatg
aagaacgtgcggatcgacgcggagggcgtgcacgccaagttcggcgtcggccccgatcgc
gtggtggacgttcaggcacttgcgggcgacagcgtcgacaatgtgccgggcgcgcccggc
atcggcatcaagacggctgcattgttgatcaacgaattcggtagcctggaggatcttctt
gagagaacggatgaggttccgcaacccaagcgccgccagaccctgatcgaccatgccgac
cagatccgcctgtcaaagacgttggtgcagctcgattgcgagatggatctggaatacgat
ctcgacagtcttgaggtgaaggccccggtggcggacgatctcatcgccttcctctccgag
atggagttccgcaccatcgtcaagcgcgtctcggatgccctgggcgtcgaggcacccgcc
gtgaccgccaccgccgagcaggccccggcccccgcggaaaaggccgaacagcctccgttc
ccagaaacctacgactgggtccgcgacgaggcgacgctcgaggcatggatcgcgaaggcc
catgcccgcggctatgtcgcggtcgatacggaaaccaccgcgctcaacgagatgcaggcc
cttttggtcggtgtgtcgctggccctcgccccgggcgaggcctgctatatcccgctgacc
cacaaggagaatgccgaggccgatctctttgcgacggatgcgctggccgaggggcagatc
gcccaggaccgcgcgctggaacttctcaagccgctcttcgaggattcgtcggtcctcaag
atcggacagaacctcaaatacgacgccaagatcctcgcacggctgggcatcggcctcgcg
ccgatcgacgacacgatgctgatgagctacgcaatgaatgcggggctgcacaatcacggc
atggacgtgctgtcggaacgctatctggggcacaacccgatcccgatcaaacagctcatc
gggtcgggcaagagccagatcaccttcgacaaggttccggtcgacaaagccgtgacctac
gcggccgaggacgcggatatcacgctgaggctctggcagctcttcaagccgcagctgcac
cgctcccgcgtcacgacggtctacgagacgctggagcgtccgctgatcccggttctggcc
cggatggaaatggccggtgtcgaggtcgatcgcgaaacgctgagccgcatgtcgggggct
ttcgcgcagaaaatggcagccctcgaatcagagatccacgagctcgccggcggggagttc
aaggtcggatcgcccaagcagctgggcgagatcctgttcgacaagctcggcctgccgggc
gggaagaagggcaagacgggagcttacgggaccggggccgacatcctcgaagacctcgcg
acggaacacgagctgcccggcaaggttctcgactggcggcaggtcagcaagctgaaatcg
acctatacggacgcgctgcaggaccatatcgaccccgagacggggcgcgttcacacgtcc
tattccatcgcgggtgccgcgaccggaaggctcgcatcgaccgatccgaacctgcagaac
atcccgatccgcaccgaggaggggcggcgcatccgcgaggcattcgtcgcgccgaaaggc
aagacgctggtggcgctcgactacagccagatcgagctcaggatcctggcccacatggcc
gggatcgaggagctgaagcaggccttccgcgaggggcaggacatccacgcgcttaccgcg
tccgagatgttcaacgtgcccatggacgagatgacgtccgagatccgccgacaggcgaag
gcgatcaatttcggcgtgatctacggcatttccggcttcgggctcgcccgcaacctccgc
atcccgcgcgaagaggcgcagggcttcatcgaccgctatttcgaacgcttccccggcatc
aaggactacatgtccgaaacgaccgccttcgccaaggaacacggctacgtccagaccatg
ttcggacgtcgcatcaacacgcccgagatcaacgcaaagggtccgggcgcgggattcgcg
cgccgtgccgcgatcaacgcccccattcagggcaccgcagccgacgtgatccgccgcgcg
atgatccgcatggacgacgcgatcgccgaccttcccgcgcggatgctgctgcaggtccat
gacgaacttctcttcgaggtggacgagggtcacgaggcggccctgatcgatcgcgcgcga
gacgtgatggagggtgcatcgttgccggccgtgcatctgagcgtcccgctcgaggtcgat
gcggggcagggtccgaactgggcctccgcccattga

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