KEGG   Palleronia sp. LCG004: RVY76_04985
Entry
RVY76_04985       CDS       T09465                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
plcg  Palleronia sp. LCG004
Pathway
plcg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:plcg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RVY76_04985 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plcg03400]
    RVY76_04985 (uvrA)
DNA repair and recombination proteins [BR:plcg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RVY76_04985 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      RVY76_04985 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 BCA_ABC_TP_C AAA_25 RsgA_GTPase nSTAND1 DUF4350 DnaJ_CXXCXGXG AAA_21 AAA_15 nSTAND3 AAA_23 SCO2_C IREH1
Other DBs
NCBI-ProteinID: WOI57148
LinkDB
Position
1033334..1036192
AA seq 952 aa
MAELKNIEVRGAREHNLKSIDVDIPRDKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLDMMQKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLFARVGT
PYSPATGKPIEAQQVQDMVDRTMAMEEGTRGYLLAPIIRDRKGEYRKEFLELRKQGFQRV
KVDGTFYELDEPPTLDKKFRHDIDVVVDRIVVREGLETRLADSFRTALDLADGIAILETA
PSEGDPERITFSEKFACPVSGFTIPEIEPRLFSFNAPFGACPECDGLGVELFFDERLVVP
DQNLKITDGAIAPWRKGKSPYFTQTIEAIAKHYGFKQSTKWADLPDEAKTVFLFGSGETE
IKFRYDEGGRVYEVSRAFEGVIPNMERRYRETDSSWIREEFERYQNNRPCGACDGYRLRP
EALAVKIDGMHVGQVVQMSIREAWEWCERVPAALTAQKNEIARAILKEIRERLGFLNNVG
LEYLTLSRNAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLTTLKNL
RDQGNTVIVVEHDEEAIREADYVFDIGPGAGVHGGEVVAHGTPQEIESDPKSVTGDYLAG
RRAINVQPDRRKGNKKAIRVVEASGNNLKDLSVDFPLGKFVCVTGVSGGGKSTLTIETLF
KTASMRLNGARQTPAPCKTIKGLEHLDKVIDIDQRPIGRTPRSNPATYTGAFSPIRDWFA
GLPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVECETCKGARYNRETL
EIRFKGKSIADVLDMTVEEAQGFFQAVPSIREKMDALVRVGLGYIRVGQQATTLSGGEAQ
RVKLSKELAKRSTGRTLYILDEPTTGLHFEDVKKLLEVLHELVDQGNTVVVIEHNLDVIK
TADWLIDIGPEGGDGGGELVATGTPEEVSENEASHTGRYLKPMLTPRKVAAE
NT seq 2859 nt   +upstreamnt  +downstreamnt
atggccgagctgaagaacatcgaagtccgtggcgcgcgggaacacaacctcaagagcatc
gatgtcgatattccccgcgacaagcttgtcgtgatcacgggtctgtcgggatcgggcaag
tcgtcgctggccttcgacacgatctatgccgaagggcagcgccgctatgtcgaatccctt
tcggcctatgcgcggcaattcctcgacatgatgcagaagcccgatgtcgatcatatcagc
ggcctcagccctgccatcagcatcgagcagaagacgacctccaagaacccgcgctcgacc
gtcggcaccgtgaccgagatctacgactacatgcggttgctcttcgcccgggtcgggacg
ccttattccccggccaccggcaagcccatcgaggcgcagcaggtgcaggacatggtcgac
cggacgatggcgatggaggagggcacgcgaggctatctcctcgcgccgatcatccgtgac
cggaagggcgaatatcggaaggagttcctcgagcttcgtaagcagggcttccagagggtg
aaggtcgacggcaccttctatgagttggacgagccgcccacgctcgacaagaaattccgc
cacgacatcgacgtcgtggtcgatcggatcgtggtacgcgaagggctcgagacgcgactt
gccgacagtttccgcacggcgctcgaccttgccgacgggatcgcgatcctcgagacagcc
ccgagcgagggcgatccggagcgcatcacgttttcggagaagttcgcctgtccagtctcg
ggcttcaccatccccgagatcgagccgcgcctcttttcgttcaacgctccgttcggggcc
tgcccggaatgcgatggtctgggtgtcgagctgttcttcgacgaacgcctggtcgtgccc
gatcagaacctcaagatcacggacggtgcgatcgcaccctggcgcaagggcaagagtccg
tatttcacccagacgatcgaagccatcgccaagcattacgggttcaagcaatcgactaaa
tgggccgatctgcccgacgaggcgaagaccgtctttctcttcgggtcgggcgagaccgag
atcaagttccgttatgacgaaggggggcgggtctatgaggtgtcgcgcgccttcgagggc
gtcattccgaacatggaacgccggtatcgcgagacggattcgagctggatccgcgaggaa
ttcgagcgctatcagaacaaccggccctgcggtgcctgtgatgggtatcgcctgcgcccc
gaggctctggccgtcaagatcgacgggatgcatgtgggccaggtcgtccagatgtcgatc
cgcgaggcctgggaatggtgcgagcgggtgcccgcggcgctgaccgcgcagaagaacgag
atcgcgcgcgcaatcctcaaggaaatccgcgaacggctgggattcctgaacaatgtcggc
ctcgaatatctgacgttgtcgcgcaatgccgggaccctttcggggggcgagtcgcagcgg
atcaggttggcgagccagatcggatcgggtctgacgggcgttctctatgtgctcgacgag
ccgtcgatcggcctgcatcagcgcgacaacgaccggttgctcacaacgctgaagaacctg
agggatcagggcaataccgtcattgtggtagaacatgacgaagaggcgatccgggaggcg
gattacgtcttcgatatcggccccggagccggcgtccatggcggagaggtcgtcgcgcac
ggaacgccgcaggagatcgagagcgatccgaagagcgttaccggcgattaccttgccggc
cggcgcgcgatcaatgtgcaaccggaccgtcggaagggcaacaagaaggcgatccgcgtc
gtggaagcgtcgggcaacaatctcaaggatctgagcgtcgatttccctttgggcaagttc
gtctgcgtaacgggcgtttcgggcggcggcaagtcgaccctcacgatcgagaccttgttc
aagaccgcctccatgcggttgaacggtgcgcgtcagacacccgcgccctgcaagacgatc
aaggggttggagcatctcgacaaggtgatcgacatcgaccaacgcccgattgggcgtacg
ccacgctcgaatcccgccacgtataccggggcgttctcgccgatccgcgactggttcgcc
gggttgccggaggcgaaggcccgcggctacaagcccgggcggttcagcttcaacgtcaag
ggcggtcgttgcgaggcctgccagggcgacggtgtcatcaagatcgagatgcacttcttg
cccgacgtctatgtcgaatgcgagacctgcaagggcgcacgctacaatcgtgagacgctg
gaaatcaggttcaagggcaagagcatagcagatgttcttgatatgacggttgaagaagcg
cagggctttttccaagccgtgccttcgatccgcgagaagatggacgcgctggtgcgcgtg
ggccttggctatatccgcgtgggtcagcaggcgacgaccctttcgggcggcgaagcgcag
cgcgtgaagctgtcgaaggaactcgcgaagcgatcgacgggccgcacgctctatatcctc
gacgagccgacgacgggtctgcatttcgaggacgtgaagaagctcctggaagtgcttcat
gagcttgtcgatcagggaaacacggtcgtggtcatcgagcacaatctcgacgtgatcaag
acggccgactggctgatcgatatcggtcccgagggcggcgacggcggtggagagctggtc
gcaaccggaacgccagaggaggtctcggagaacgaggcctcgcatacgggacgttatctg
aagccgatgctgacgccacgaaaggtcgcggccgagtag

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