Palleronia sp. LCG004: RVY76_05475
Help
Entry
RVY76_05475 CDS
T09465
Name
(GenBank) extracellular solute-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
plcg
Palleronia sp. LCG004
Pathway
plcg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RVY76_05475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plcg02000
]
RVY76_05475
Transporters [BR:
plcg02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RVY76_05475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WOI57235
UniProt:
A0AAU0HRJ8
LinkDB
All DBs
Position
1132634..1134445
Genome browser
AA seq
603 aa
AA seq
DB search
METNLFRCALGAATLAGIVLGGPATAQPEHGIAMYGEPALPEDFTSLPYANADAPKGGRI
VQGEVGTFDSLNPHILKGKVPWQLRSLAYESLMGRSYDEPFTLYGLLAETVETAPDRSWV
EFTLRPEARFSDGTPVTVEDVIWSYETLGTEGHPRYANSWAAVESVEQTGERKVRFTFSE
DNPELALIMGMRPILKKAQWDGLDFTQSGLDTIPISTAPYVIEDFEPGRSVTLRRNPDYW
GRDLPFMQGQANLDEIRMEFFGDESAMFEALKGGLLNIHREVNAEKWQSQYDFPAIRSGD
IVKSAIPHERPSGIWGFVMNTRRAPFDDWRVRQALIEVFNFEFINQTLNGGRLPRVSSYF
SNSVLGMDHGPAEGRVLELLEPYADELPPGTIEGYSLPEGDGTERNRQALRRAMALLDEA
GYVIENGVLMNPEGDRVTFEILLRQGDTIDQQVIDIYLSALQRIGISPRVNQVDEAQYNS
RTQVFDFDMTDYERGLSLSPGTEQRYYWGSEAATQDGSLNWMGMQSPAADTMIDAMLTSE
SNEDFVAATKALDRVLTAGRYVIPIWYRPESYIAHAADLKYPDTLPAYGDFLGFLPEVWW
QEE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaaccttttccgttgcgccctcggggccgcgacgcttgccggaatcgtgctc
ggaggtcccgcaaccgctcagccggaacacggaatcgccatgtacggcgagcctgccctg
cccgaggatttcacctccctgccctatgccaatgccgacgcacccaagggcggccgcatc
gttcagggcgaggtcggcacgttcgactccctcaatccccacatcctcaagggcaaggtc
ccttggcagctgagatcgctggcctacgaatcgcttatgggacgctcctacgacgagccc
ttcactctctacggactgctcgcggaaacggtcgagaccgcgcccgaccgctcatgggtc
gagttcacgctccgccccgaggcgcgtttctccgacggcacacccgtcacggtcgaggat
gtcatctggtcctacgagaccctcgggaccgaggggcatccgcgctacgcaaacagctgg
gccgccgtagaaagcgtcgaacagacgggagagcgcaaggtccggttcacgttctccgag
gacaaccccgaactcgccctcatcatggggatgcggccgatcctgaagaaggcgcaatgg
gacggcctcgacttcactcaatcggggctcgatacgattccgatctccacggccccctac
gtgatcgaggacttcgaaccgggacgatccgtgacactgcgccgcaacccggattactgg
ggccgggatctgccgttcatgcaggggcaagccaatctcgacgaaatccggatggagttc
ttcggtgacgaatccgcgatgttcgaggcattgaagggcggcctcctgaacattcatcgc
gaggtcaacgccgagaaatggcagagccaatacgacttccccgccatacgttcgggcgac
atcgtcaaatccgccattccgcatgaacgcccttccggcatctggggattcgtcatgaac
acgcgacgcgccccgttcgacgattggcgggtccggcaggcattgatcgaagtcttcaat
ttcgagttcatcaaccagacgctcaatggcggccgcctgccgcgggtcagctcgtacttt
tcgaactcggttctcgggatggatcacgggccggcggaaggtcgcgtgctcgagcttctc
gaaccttacgcggacgaacttccccccggcacgatcgagggctattcgctgcccgagggc
gacgggacggagcgcaaccgacaggcgctccgtcgcgcgatggcactgctcgacgaggcg
ggctacgtgatcgagaacggtgtcttgatgaaccccgagggcgaccgcgtcactttcgag
atccttctgcggcagggcgacacgatcgaccagcaggtcatcgacatctatctctccgcg
ctccagcggatcggaatctcaccgcgcgtcaatcaggtcgacgaggcgcagtacaattcc
cgcacgcaggtcttcgatttcgacatgacggattacgaacgtggcctgtcgctcagcccc
ggtaccgaacagcgctattactgggggtccgaggccgcgacgcaggacggatcgctcaac
tggatgggaatgcagagccccgcggccgacacgatgatcgacgcgatgctgacctccgaa
agcaacgaggatttcgtggccgcgaccaaggcgctcgaccgggttctgaccgcggggcgc
tatgtcattccgatctggtatcgccccgaaagctacatcgcccatgccgccgatctgaaa
tatcccgacaccctcccggcctacggcgactttctcggcttcctccccgaggtctggtgg
caggaggagtag
DBGET
integrated database retrieval system
