Palleronia sp. LCG004: RVY76_07855
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Entry
RVY76_07855 CDS
T09465
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
plcg
Palleronia sp. LCG004
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plcg03009
]
RVY76_07855 (rimK)
Ribosome biogenesis [BR:
plcg03009
]
Prokaryotic type
ribosomal protein modification factors
RVY76_07855 (rimK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
Zn_protease
GSH-S_ATP
ATP-grasp_3
ATPgrasp_ST
GARS_A
ATP-grasp
Dala_Dala_lig_C
Motif
Other DBs
NCBI-ProteinID:
WOI54982
UniProt:
A0AAU0HGL8
LinkDB
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Position
1635456..1636853
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AA seq
465 aa
AA seq
DB search
MSEPLRLGWEEWVGLPDLGLPALKAKVDTGAKTSALHASDIEPFGPSGKPKVRFLMHPIP
SRPELAIPCSATIIDRREVTSSNGDTELRYVIETEMSVGDQAWPVELTLTDRGTMQYRML
LGRQAFSDDVVVMPNESFCQPQLSYDVYSSAKVREVAPDRALRIAVMSREPMSYSTKRLV
SEGETRGHTVEVIDTLRCYMTLNALSPEIHYDGKRLPRYDAVIPRVGASITPYGTAIIRQ
FETIGTWCINGSDGITASRDKLHAHQVLARQKIGMPTTAFAASPKDTANLMNLVGSAPLI
VKLLESTQGKGVVLAETKKAAESVISAFRGLRANFLVQNFVKEAAGEDIRCLVLDGRVVA
SIKRTSAGGDFRSNLHLGGTAEAVRITKTERETAQRAAKAFGLGFAGVDLLRASDGPKVL
EVNSSPGLEGVEKASKRDIAGALYDMIEKRVRPTPVRKARASRAV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaccgctgcgcctcggctgggaggaatgggtgggccttccggatctgggactg
cccgcgctcaaggccaaggtcgataccggtgccaagacgagcgcgctccatgcctcggat
atcgagccgttcgggccgtccggcaagcccaaggtgcgctttctcatgcatccgattccg
tcgcgtcccgaactcgccattccctgctccgccacgatcatcgatcgccgggaagtgacg
tcgagcaacggcgacaccgagctgcgctacgtcatcgagaccgagatgagcgtgggcgac
caggcctggccggtggagctgacgctgaccgaccgcggcacgatgcagtaccgcatgctt
ctggggcggcaggccttctcggacgacgtggtggtcatgcccaacgaatcgttctgccag
ccgcagttgagctatgacgtctattcgagcgcgaaggtgcgggaggtcgcgcccgatcgc
gcgcttcgcatcgcggtgatgagccgcgaacccatgagctattccacgaagcggctcgtc
agcgagggagagacgcggggccacacggtcgaggtcatcgacacgctgcgctgctacatg
acgctgaacgcgctgagccccgagatccattacgacggcaagcggctgccgcgctacgac
gccgtcatcccgcgcgtcggcgcgtcgatcacgccctacggcaccgcgatcatccgtcag
ttcgagacgatcggcacctggtgcatcaacggctcggacgggatcacggcgtcccgcgac
aagctgcatgcgcatcaggttctcgcgcggcagaagatcgggatgcccacgaccgctttc
gcggcgtcgcccaaggatacggcgaacctcatgaacctcgtgggaagcgcgccgctgatc
gtgaaactgctggaatcgacgcaaggcaagggcgtggtgctggccgagacgaagaaggcc
gccgaatccgtcatcagcgcattccgcggattgcgcgcgaatttcctcgtgcagaacttc
gtgaaggaagccgcgggagaggacatccgctgtctggttctggacgggcgggtcgtggcc
tcgatcaagcggacgagcgcggggggcgatttccgctcgaacctgcatctcggcggcacg
gccgaggcggtccggatcaccaagaccgaacgcgagacggcgcagcgggccgcgaaggcc
ttcgggctgggcttcgcgggcgtcgatctgctcagggcgagcgacgggccgaaggtgctc
gaggtcaattcctcgccgggtctcgaaggcgtcgagaaggcgagcaagcgcgacattgcc
ggcgcgctttacgacatgatcgagaagcgggtccgccccaccccggtgcgcaaggcccgc
gcatcccgcgccgtctga
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