KEGG   Palleronia sp. LCG004: RVY76_10105
Entry
RVY76_10105       CDS       T09465                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
plcg  Palleronia sp. LCG004
Brite
KEGG Orthology (KO) [BR:plcg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:plcg03032]
    RVY76_10105
   03036 Chromosome and associated proteins [BR:plcg03036]
    RVY76_10105
   03400 DNA repair and recombination proteins [BR:plcg03400]
    RVY76_10105
DNA replication proteins [BR:plcg03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    RVY76_10105
Chromosome and associated proteins [BR:plcg03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    RVY76_10105
DNA repair and recombination proteins [BR:plcg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      RVY76_10105
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_bac_2 HU-CCDC81_euk_2 DUF2267 SasG_E
Other DBs
NCBI-ProteinID: WOI55397
LinkDB
Position
complement(2065403..2065693)
AA seq 96 aa
MATKPMTKTQLVAALAEKMDSDKKSAGEALDAITEVITEEVSGGGAVTLPGVGKIYCRER
PERMVRNPATGEQIKKDADKVVKMTIAKALKDSVNN
NT seq 291 nt   +upstreamnt  +downstreamnt
atggcgaccaaaccgatgaccaagacgcagctcgtcgcagcgctggccgagaagatggac
agcgacaagaaatccgccggcgaagcactcgatgcgatcaccgaggtcatcaccgaggaa
gtttcgggtggtggtgccgtgacccttccgggcgtcggcaagatctattgccgcgagcgt
cccgagcgcatggtccgcaatcccgccaccggcgagcagatcaagaaggatgccgacaag
gtcgtcaagatgacgatcgccaaggccctgaaggacagcgtcaacaactga

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