Palleronia sp. LCG004: RVY76_10535
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Entry
RVY76_10535 CDS
T09465
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
plcg
Palleronia sp. LCG004
Pathway
plcg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RVY76_10535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plcg03400
]
RVY76_10535
Enzymes [BR:
plcg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RVY76_10535
DNA repair and recombination proteins [BR:
plcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RVY76_10535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
HTH_15
Motif
Other DBs
NCBI-ProteinID:
WOI55479
LinkDB
All DBs
Position
complement(2148957..2149721)
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AA seq
254 aa
AA seq
DB search
MENWESYMAARAALEWQIELGADEAIGDAPVDRYAKTPEPEPAAEAEPVQSVRQNDAHPD
PVEVARRAAAAANGLEGLRAAIAAFEGCELKRGARNLVFSDGDPAARVMIVGEAPGRDED
LSGRPFVGRAGQLLDRMLGAIGLDREGTGSVYITNVLPWRPPQNREPRPDEIAMMLPFVE
RHVTLADPEILILMGNVSCQAMLGRKGITRLRGQWSEAVGRPALPMFHPAYLLRNPAAKR
EAWADLLSLRARLA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactgggaatcgtacatggcggcgcgtgcggcgctcgaatggcagatcgaactc
ggtgcggacgaggcgatcggcgatgcgcctgtcgaccgatatgccaagacgcccgaaccc
gaaccggcagccgaagccgaacctgtacagtcggtccggcagaacgacgctcaccccgat
ccggtcgaggtcgcgcgtcgggcggccgctgcggcgaacggcctcgagggactgcgcgcg
gcgatcgcggcattcgagggatgtgagctcaagcggggcgcacgcaacctcgttttctcc
gacggcgatccggcagcgcgggtgatgatcgtcggcgaagctccgggcagggacgaggat
ctgtccggccgccccttcgtcgggcgggccggacaactgctcgaccgcatgctgggcgcg
atcgggctcgatcgggaaggcaccggatcggtctacattacgaacgtgctgccgtggcgg
cccccgcagaaccgggagccgcgcccggacgagatcgcgatgatgctgccgttcgtcgaa
cggcacgtgacgcttgccgatcctgagatcttgatcctcatgggaaacgtctcgtgtcag
gcgatgctcgggcgcaaggggatcacgcggctgcgcggacagtggagcgaggcggtgggg
cgccccgcgctcccgatgttccaccctgcctacctgctgcggaaccccgcggccaagcgt
gaggcctgggcggatcttctgagccttcgcgcccggctcgcatga
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