Palleronia sp. LCG004: RVY76_11055
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Entry
RVY76_11055 CDS
T09465
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
plcg
Palleronia sp. LCG004
Pathway
plcg00300
Lysine biosynthesis
plcg01100
Metabolic pathways
plcg01120
Microbial metabolism in diverse environments
plcg01230
Biosynthesis of amino acids
Module
plcg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RVY76_11055 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plcg01002
]
RVY76_11055 (dapE)
Enzymes [BR:
plcg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RVY76_11055 (dapE)
Peptidases and inhibitors [BR:
plcg01002
]
Metallo peptidases
Family M20
RVY76_11055 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WOI55576
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Position
2258553..2259689
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AA seq
378 aa
AA seq
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MAEIDPVELTAELIRCPSVTPVEGGAIDLLHRLLDDAGFVCTRIDQGGIANLHAIWDRGG
KILGFNGHTDVVPVGDPAAWTHDPFGAEMSDGLVYGRGACDMKSGVAAFVAAAIEHAGAG
RPGSIAIAITGDEEGDGIHGTPAILDWMDRTGARMDACIVGEPTCPETMGEMIKVGRRGS
MTVWLTATGRQGHSAYPQNARNPIHAMVALLDRLIAFDLPDASDLFDPTSVQVTGFDTGN
AANNVIPGQCRAMANIRFNDAHRSSDLSEWIADEIAAVTRATDVEFSTETKVSGESFVTE
EGDFSRLIARAVEAETGISPILSTSGGTSDARHIRAHCPVVEVGLVGRTMHQVDEYASID
DIRTLKAIYSRILDAYAR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggctgagatcgatcccgtcgaacttacggcagaactcatccgctgcccgtcggtcacg
cccgtcgaaggcggcgcgatcgatctcctgcatcgccttctcgatgatgccggtttcgtc
tgtacccgcatcgaccaggggggcatcgccaaccttcatgcgatctgggaccggggcgga
aagatcctcggcttcaacggacatacggatgtcgttccggtgggcgatcccgcagcctgg
acgcacgatccgttcggtgccgaaatgtcggatggcctcgtctacggacgcggagcctgc
gacatgaaatcgggcgtggcggccttcgtcgccgccgcgatcgaacatgccggggcgggc
agaccgggctccatcgccattgccatcaccggggacgaggaaggtgacggaatccatggc
acgcccgccatcctcgactggatggaccggacgggcgcacgcatggatgcctgcatcgtg
ggcgaacccacctgtcccgagacgatgggcgagatgatcaaggtcggtcgccggggctcc
atgaccgtctggcttaccgccacgggccggcagggccattcggcctatccgcagaacgca
cgcaacccgatccacgcgatggtggcgctgctcgatcgtctgatcgccttcgacctgccc
gatgcctccgaccttttcgatccgacgagcgtgcaggtcaccggcttcgataccgggaac
gcggccaacaacgtcattcccggccaatgccgcgcgatggcgaacatccgcttcaacgac
gcgcatcgctcctccgacctgtcggaatggatcgcggacgaaatcgcggccgtcacccgg
gcgaccgatgtcgaattctcgaccgaaaccaaggtctcgggcgaaagcttcgtcaccgag
gaaggcgacttctcgcgcctcatcgcccgcgcggtcgaggccgagaccggtatttcgccg
atcctgtcgaccagcggcggcacgtcggatgcgcgccatatccgcgcgcattgccccgtg
gtcgaggtggggctggtgggtcggacgatgcatcaggtcgacgaatacgcatccatcgac
gacatccggacgctgaaggcgatctattcccgcatcctggacgcgtacgcacgatga
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