KEGG   Palleronia sp. LCG004: RVY76_11715
Entry
RVY76_11715       CDS       T09465                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
plcg  Palleronia sp. LCG004
Brite
KEGG Orthology (KO) [BR:plcg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plcg03400]
    RVY76_11715
Enzymes [BR:plcg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RVY76_11715
    5.6.2.6  RNA 3'-5' helicase
     RVY76_11715
DNA repair and recombination proteins [BR:plcg03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    RVY76_11715
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: WOI55701
LinkDB
Position
2389352..2391799
AA seq 815 aa
MVDLPSEFHDWFARRGWSLHPHQQEMLDRADDPSLLLIAPTGGGKTLAGFLPTLSELAAG
GHDGLHTLYVSPLKALANDIRRNLTTPVTEMGLPIRIEDRTGDTTATARKRQRADPPHIL
LTTPESLALLTSYEDAPRIFAGLRRVVVDEIHALSESKRGDQLMLAVSRLQAMCPDLRRV
GLSATVEDPEAIARFLARHPDPCEIVHADPGPDPDIAMLETDAAPPWSGGGGRYAIPAVL
DEVRRHRTTLIFHNTRAQAEIFFHELWLQNEDDLPIGIHHGSLSREQRARVEAAMVAGEL
RAIVCTGSLDLGIDWGDVDLVIQIGAPKNVKRLVQRIGRANHRYNAPSKALLVPANRFEV
VECVAALQAVVERNLDGDPRGAGPRDVLCQHILIRAASGPFAADTLFGEVISAGAYAGLT
REEFDACLDFVATGGYALRAYDQWKRLKQDADGLWHLRDPRAAQRIRQNIGTIMDTDLLK
VRMKNRRGGTPLGEVEEGFAATLTQGDTFLIGGQIVRYEGLKEMVVEVTRRADREPKIAT
FMGTKFATSTQLSERILRMFAQEDWPDLPQATRDWLHLQRRRSQLPQTRRILIESFPHEG
REHTCVYGFAGRNAMQTLGLLLTARMEEQGLHPMGFVSTDYATLIWGLDPLIHPEPLFDR
AGLRETFETWLAGNAVMKRTFKQSAVIAGLIERQTRGQRKSGKQATFSSDILYDVLSRYD
PDHLLLDITREEALKGLVDFGRIEDMLDRTAGHVDHVVLDRVTPLAAPLFLEAGRVPVEG
AATERLLAEEATRLMATAGLDMDPAAEKRHWRMPS
NT seq 2448 nt   +upstreamnt  +downstreamnt
atggtcgatctgccctccgagtttcacgactggttcgcgcgccgcggctggtcgctccac
ccgcatcagcaggagatgctggatcgtgccgacgatccgtctctcctcctcatcgcgccg
acagggggcggcaagacgcttgcggggttcctgccgacattgtccgagctcgcggcgggg
ggacatgacgggctgcacacgctctacgtctcgccgctgaaggcgctggcgaacgacatc
cggcgcaacctgacgaccccggtgaccgagatgggtctgcccatccggatcgaggatcgc
acgggcgatacgaccgcgaccgccagaaagcgccagcgcgccgatccgccgcatatcctg
ctcaccacgcccgagagcctcgcgcttctgacgagttacgaggacgcgccgcggatattc
gcaggactgaggcgcgtcgtcgtggacgagatccacgcattgtcggaatcgaagcgcggc
gatcagctcatgctggcagtgtcgcggcttcaggccatgtgcccggatctgcggcgcgtg
ggtctgtcggcgacggtcgaggatccggaggccatcgcgcggttcctcgcccgtcatccc
gatccatgcgagatcgtccacgccgatcccgggcccgatcccgacatcgccatgctcgag
accgacgcggcaccgccatggtccggaggcggcggacgctatgcgatacccgccgtgctc
gacgaagtgcgacggcacaggacgacgctcatcttccacaatacccgcgcgcaggccgag
atattcttccacgaactctggctgcagaacgaggacgaccttccgatcggcatccatcac
ggatcgctctcgcgcgagcagcgcgcccgggtcgaggcggcgatggtcgcgggagagctc
agggcgatcgtctgcaccggttcgctcgatctcgggatcgactggggtgacgtggacctc
gtgatccagatcggcgcgccgaagaacgtgaaacggctcgtgcagcggatcgggcgcgcg
aaccaccgctacaatgccccgtcgaaggccctcctggttcccgcgaaccggttcgaggtc
gtcgaatgcgtcgcggcgctgcaggcggtggtcgaacgcaatctcgacggcgatccgagg
ggggccggtccccgggacgtactctgccagcatatcctgatccgcgcggcttccgggccg
ttcgcggccgatacgctcttcggcgaggtgatttcggcgggagcctatgcagggctcaca
cgggaagaattcgacgcctgcctcgattttgtggcgacgggtggctatgcgctcagggcc
tacgatcagtggaagcgcctcaagcaggacgcggacgggctctggcacctgcgagacccc
cgcgcggcccagcgcatccgccagaatatcggcacgatcatggataccgatcttctgaag
gtccggatgaagaaccgtcgcggcggcacgccactgggcgaggtcgaggaaggtttcgcc
gcaacgctgacgcagggcgacacattcctcatcggcggtcagatcgtccgctacgagggg
ctcaaggagatggtcgtcgaggtcacgcgccgcgccgatcgcgagcccaagatcgccacg
ttcatggggacgaagttcgcgacctcaacccagctttccgagcggatccttcggatgttc
gcccaggaggactggccggatctgcctcaggcgacccgcgactggctgcatctgcagcgc
agacgttcgcagcttccccagacaaggcgcatcctgatcgaaagctttccgcacgaaggg
cgcgagcatacttgcgtctacggctttgcgggacgcaacgcgatgcagacgctcggtctt
ctgctgaccgcgcgaatggaggagcagggccttcacccgatgggtttcgtctcgaccgat
tacgcaacgttgatctgggggctcgatccactgatccaccccgagccgctcttcgaccgc
gccggcctgcgagagacgttcgagacctggcttgccgggaatgccgtgatgaagcggaca
ttcaagcaatcggccgtcatcgcggggctgatcgaacggcagacccgcggccagcgcaag
tccggcaagcaggcgacgttctcgtccgatatcctctacgacgtgctgagccgctacgat
ccggatcacctcctgctcgacatcacgcgggaggaggcgctgaaaggcctcgtcgatttc
ggccggatcgaggacatgctcgaccggacggcgggccatgtcgatcacgtcgtgctcgat
cgcgtgacgcccctcgcggccccgctcttcctcgaggcggggcgcgtcccggtcgagggc
gcggcgaccgaaaggctcctggccgaggaagccacgcgcctcatggcgacggccgggctg
gatatggaccctgcggcggaaaagcgccattggcgcatgccttcgtga

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