Palleronia sp. LCG004: RVY76_12420
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Entry
RVY76_12420 CDS
T09465
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
plcg
Palleronia sp. LCG004
Pathway
plcg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RVY76_12420 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plcg03400
]
RVY76_12420 (ruvB)
Enzymes [BR:
plcg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RVY76_12420 (ruvB)
DNA repair and recombination proteins [BR:
plcg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RVY76_12420 (ruvB)
RecFOR pathway proteins
RVY76_12420 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_22
Mg_chelatase
AAA_16
AAA_14
Rad17
TsaE
AAA_3
AAA_17
RNA_helicase
AAA_33
nSTAND3
NTPase_1
AAA_18
NB-ARC
NPHP3_N
NACHT
AAA_28
ABC_tran
Cytidylate_kin
AAA_24
Motif
Other DBs
NCBI-ProteinID:
WOI55833
UniProt:
A0AAU0HK90
LinkDB
All DBs
Position
2539025..2540059
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AA seq
344 aa
AA seq
DB search
MSDAPDPALRPERLPDDDGPALRPQTLDAFTGQAEARANLKVFIESARMRSKAMDHALFH
GPPGLGKTTLAQIVARELGVNFRMTSGPVLAKAGDLAAILTNLEARDVLFIDEIHRLNPV
VEEVLYPALEDFELDLVIGEGPAARSVRIELQPFTLVGATTRLGLLTTPLRDRFGIPVRL
QFYTVNELQDIVARGARLMGVPAEPDGTREIAARARGTPRIAGRLLRRVVDFALVEGDGR
LTRALADDALTRLGVDKLGLDGADRRYLKLIAEHYQGGPVGIETLSAALSESRDALEEVI
EPYLLQQGLIQRTPRGRMLAQGAWTHLGMARPRSDIAPDLFGDV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcgcccgatcccgccctgcgccccgaacgtcttcccgacgatgacggccct
gccctgcggccgcagacgctcgacgccttcaccggacaggccgaagcgcgcgcaaacctg
aaggtcttcatcgagagtgcgcggatgcgctcgaaggcgatggatcacgcgctcttccac
gggccgccgggccttggcaagacgacgctcgcgcagatcgtggcgcgcgagctcggcgtg
aacttccgcatgacgagtggccccgtgctcgccaaggcgggcgatcttgccgcgatcctc
accaatctggaggcgcgtgacgttcttttcatcgacgagatccatcggctgaacccggtg
gtcgaggaggtgctctatcccgcgctcgaggatttcgagctcgacctcgtgatcggagag
gggcccgccgcgcgatcggtcaggatcgagctgcaacccttcacgctggtgggcgcgacg
acgcggctcggccttctgaccacgccgctgcgcgaccggttcggcatccccgtccggctg
caattctacacggtgaacgagctgcaggacatcgtcgcgcgcggcgcgcggctgatgggt
gttccggccgagccggacggcacgcgcgagatcgcggcacgcgcacgcggcacaccgcgg
atcgcaggcaggctcctgcgtcgggtcgtcgatttcgcgctggtcgagggcgacggacga
ctgacgcgcgcacttgccgacgacgcgctgacgcgactcggggtagacaagctgggtctc
gacggggctgaccgacggtatctgaagctgatcgccgagcattatcagggcggtcctgtg
gggatcgagaccctgtcggccgcgctcagcgaatctcgcgacgcactcgaggaagtcatc
gagccctatctgctgcagcagggactgatccagcgcacaccgcgcgggcggatgctggcg
cagggggcatggacgcatctcggcatggcgcggccgcggagcgacatcgcgcccgacctc
ttcggggacgtctag
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