Palleronia sp. LCG004: RVY76_12925
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Entry
RVY76_12925 CDS
T09465
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
Organism
plcg
Palleronia sp. LCG004
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
RecC_C
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WOI55925
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All DBs
Position
2641904..2644849
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AA seq
981 aa
AA seq
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MFDADPTPRLFGLPPGADFPAELVRGIEARLGDAAPEDWARVELYVNTSRTARRLSAIFG
AGPPRLLPRVRLLSALGTDPLLTDLPPPADPLGRRLELTQLTAALIRADPDLAGQSAAFD
LADSLATLIDEMQGEGVPLGAITGLDVTDQSGHWQRALRFLSLLEGFLAADTTPDPEARQ
RRVVEALIEKWQIAPPAHPVIVAGSTGSRGTTALLMRAVAQLPQGAVILPGVDPDMPREI
WDAMGDALSAEDHPQYRFVRIARDLDLHPGDIRPWTDADPDPQRRRLVSMALRPAPVTDG
WLRDGPALGDLVEAAANVSLLEAPDPRIEALAIAIRLRAALDEGKVAALISPDRVLTRQV
TAALDRWGIEPDDSAGRPLALSVPGRLLRHMAARLGTPSAPEDLLTILKHPLTHTGTDRG
PHLRLTHELELWLRRDGPPHPTPEDLHGWASRSGIEGAEEWVAWIEATILAAALLRDGAL
SDIVARHLSLTEALAGGPAGGSGELWLERAGEKAAEVMSGLGDQADAAGAFTLTDYRALL
DAILDTDVRDPIRPDPRVMIWGTLEARVQGADLVILGGLNEGVWPEAPKADPWLNRRMRA
EAGLLLPERRIGLSAHDFQQAVCAPEVLITRAARNAEAETVMSRWLNRLTNLMAGLEATG
GRTALDEMRARGRVWLTHAETLEARILPSPPERRPAPCPPVHMRPRELSVTDIQRLVRDP
YAIYARRILNLSPLDSLRKDPDAALRGTLIHSVFERYVEEGIDPAAPNAADALMRLAEEE
LIRDVPWRATRIAWLARLERVVPWFLDQDAAHRATAMPEAQERRARLEVAGTGVTIVGKA
DRIDRATDGGLVLLDYKTGAAPTARQIRQYDPQLLIEAVMAEAGTFEGLPAARVAQVGHV
ELGSTPRWRSHPLRDPAAEVPLSPEEALAMLTKLLSAYGDEGQGYASRRAMEKMAYEHGY
DHLARFGEWDISERPEKVVLR
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgcggacccgacaccgcggctcttcgggctgccgcccggcgccgatttcccc
gccgaactcgtccgcgggatcgaggcgcggctgggcgatgccgcgcccgaggactgggcc
cgcgtcgagctctacgtcaacacgagccgcacggcgcgcaggctctcggcaatcttcggc
gcggggccgccgcgtctcctgccgcgggtgcgccttctctcggcgctcggcaccgatccc
ctcctgaccgacctgcccccgcccgccgatccgctcggccgcaggctggagctcacgcag
ctcacggccgcgctcatccgtgccgatcccgacctcgcggggcaaagcgcggccttcgac
cttgccgacagcctcgccaccctcatcgacgagatgcagggcgagggcgtcccgctcggg
gccatcaccgggctcgacgtgacggatcaatccggccactggcagcgcgcgttgcgattc
ctgtcccttctcgaagggttcctcgctgccgatacgacccccgaccccgaggcacgccag
cgccgcgtcgtcgaggcgctgatcgagaaatggcagatcgcaccgccggcccatccggtg
atcgtcgcgggctccacggggtcgcggggaacgaccgcgcttctgatgcgggcggtcgcg
cagctgccacagggcgccgtgatcctgccgggggtcgatccggacatgccgcgcgaaatc
tgggacgcgatgggcgacgccctttcggccgaggaccatccgcaataccgcttcgtgcgg
atcgcgcgcgatctggacctgcatccgggcgacatcaggccctggaccgacgccgatccc
gatccgcagcggcgcaggctcgtctcgatggcgctgcggccagcgccggtcacggatggc
tggctgcgcgacggccccgctctgggcgaccttgtcgaggcggcggccaacgtctcgctg
ctcgaggcgcccgatccgcggatcgaggcgctcgccatcgcgatccggctgcgcgccgcg
ctcgacgaggggaaggtcgcggcgctcatctctcccgatcgggtgctgacgcggcaggtg
accgccgcgctcgaccgctgggggatcgaacccgacgacagcgccgggcgaccgctcgcg
ctttcggtgccggggcggctgctcaggcacatggccgcgcggctgggcaccccctccgcg
cccgaggatctgctgacgatcctcaagcacccgctgacccatacgggaaccgatcggggc
ccgcatctgcgcctgacgcacgaactcgagctctggctgcgccgcgacggcccgcctcac
ccgacgcccgaagatctgcacggctgggccagccgctccggcatcgagggcgccgaggaa
tgggtcgcatggatcgaggcgacgatcctcgccgccgccctgctccgcgacggtgccctt
tccgacattgtcgcccggcatctgagcctcaccgaggcgctcgccggcggccctgcgggc
ggcagcggtgagctctggctcgaacgggcgggcgaaaaggcggcagaggtcatgtcgggc
ctcggcgatcaggccgatgcggccggcgccttcaccctgacggattaccgtgcgctgctc
gacgcgatcctcgacaccgatgtccgcgacccgatccgacccgatccccgcgtgatgatc
tggggcacgctcgaggcgcgggtgcagggcgccgatctggtgatcctcggcgggctcaac
gaaggcgtctggcccgaggcgccgaaggccgatccctggctgaaccggcggatgcgggcc
gaagcgggcctcctcctgcccgaacggcgcatcggactgtcggcccacgatttccagcag
gccgtctgcgcccccgaggtcctgatcacccgcgcggcgcgcaatgccgaggccgagacg
gtcatgtcccgctggctcaacaggctcaccaacctgatggcggggctcgaggcgacgggc
ggcaggaccgcgctcgacgagatgcgggcgcgcggccgcgtctggctcacccatgccgag
acgctcgaggcgcgcatcctgccttcgccgcccgaacggcgccccgcgccctgcccgccc
gtgcatatgcgcccgcgcgagctcagcgttaccgacatccagcggctcgtccgcgatccc
tatgcgatctacgcgcggcggatcctcaacctctccccgctcgattcgctgaggaaagac
cccgatgcggcgctgcgcggcacgctgatccacagcgtgttcgagcgctacgtcgaagag
ggcatagaccccgcggcgcccaacgcggccgacgccctcatgcgcctggccgaggaggag
ctgatccgcgacgtgccctggcgggccacgcgcatcgcctggctcgcccggctcgaacgg
gtcgtgccctggttcctcgaccaggacgcggcgcatcgcgcaacggccatgccggaggcg
caggagcgtcgcgcccggctcgaagtggcaggcacgggagtcaccatcgtgggcaaggcc
gaccggatcgaccgcgcgaccgatggcggcctcgtcctgctcgactacaagacgggcgct
gccccgacggcccggcagatccgtcaatacgatccgcagctcctgatcgaggcggtgatg
gccgaagccggtacattcgaggggttgcccgccgcccgcgtcgcgcaggtcggccatgtc
gaactcggctcgaccccgcgctggcgcagccacccgctgcgtgaccccgcagccgaagtg
ccgctgtcgcccgaggaagcgctcgcaatgctgacgaagctcctctcggcctatggcgac
gagggccagggatacgcttcgcgccgcgcgatggaaaagatggcctacgagcacggctac
gaccacctcgcgcggttcggtgaatgggacatatccgaacgccccgaaaaggtcgtgctg
cgatga
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