Palleronia sp. LCG004: RVY76_14065
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Entry
RVY76_14065 CDS
T09465
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
plcg
Palleronia sp. LCG004
Pathway
plcg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RVY76_14065 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plcg03019
]
RVY76_14065 (recQ)
03400 DNA repair and recombination proteins [BR:
plcg03400
]
RVY76_14065 (recQ)
Enzymes [BR:
plcg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RVY76_14065 (recQ)
Messenger RNA biogenesis [BR:
plcg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RVY76_14065 (recQ)
DNA repair and recombination proteins [BR:
plcg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RVY76_14065 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Rhodanese
ResIII
Motif
Other DBs
NCBI-ProteinID:
WOI56137
UniProt:
A0AAU0HJX9
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All DBs
Position
2874706..2876748
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AA seq
680 aa
AA seq
DB search
MSGLDEILTRVFGFADFRPGQREIVEAVAGGEDVLAIMPTGGGKSLCYQLPALEGTGTTL
VISPLIALMRDQVRALRASGVAAGALTSGNTDEESDAVWRGLEDGSLRLLYMAPERLASG
GMERVLRQSGIARIAVDEAHCVSQWGHDFRPDYLRIGELRRALGVPLAAFTATADEETRA
EIVERLFGQDATPRQFLRGFDRPNIHLAFAAKDGPRRQILDFAAARRGQPGIVYCGTRAK
TEGLAQALGQAGHAACAYHGGMESDARRAVEERFAREDGLVVCATVAFGMGVDKPDIRWV
AHADLPKSIEGYYQEIGRAGRDGAPADTLTLYGPDDIRLRRTQIDEGLAPPERKSADHGR
LNALLGLAEALGCRRVQLLGYFGEAAEPCGNCDLCDRPPETFDATEAVRMALSAILRTDE
RFGTGHLIDILTGNPTDKVRERGHDDLPTFGVGRAHDKRHWQAVFRQMMGRDLVRPDAER
HGALRMTHAARPILRGEAGIELRRDAIARREGPVPRALVAEEDAPLLSALKAQRRALAEA
QGVPAYVIFADRTLIEMAERRPRSLDEMARISGVGAVKLDRFGATFLKVVTGEAEEMHPA
RRKLAGRPQGALYDRLMEAQQRLARGVDGTDKPLSCASNTLSWIAERRPDSIEALARAPG
LSAPKLDRFGRAFLDAVDEG
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggactcgacgagatcctgacgcgggtcttcggcttcgccgatttccgccccggc
cagcgcgagatcgtcgaggcggtggccggcggcgaggacgtgctcgccatcatgccgacg
ggcggcggcaagtcgctctgctaccagcttccggcgctcgaggggacggggacgacgctc
gtcatctcgccgctcatcgcgctgatgcgcgaccaggtgcgcgcgctgagggcatcgggc
gtggcggcgggcgcgctcacctccggcaataccgacgaggagagcgacgcggtctggcgc
gggctcgaggatggcagcctcaggcttctctacatggcacccgagcggctcgcctcgggc
gggatggaacgggttctgcggcagtcgggcatcgcccgcatcgccgtggacgaggcgcat
tgcgtcagccagtggggccacgatttccggccggactatctcaggatcggcgagctgcgc
cgcgcgctgggcgtgccgcttgcggccttcacggcgaccgccgacgaggaaacccgcgcc
gagatcgtcgagcggctcttcgggcaggacgcgacgccgcgccagttcctgcgcggcttc
gaccggccgaacatccatctggccttcgccgccaaggacgggccgcgccggcagatcctc
gatttcgcggctgcgcggcgcggtcagcccggcatcgtctattgcggcacgcgcgccaag
accgaagggctcgcgcaggcgctcggccaggcgggacatgccgcctgcgcctatcacggc
gggatggaatccgacgccaggcgcgccgtggaggaacgtttcgcgcgcgaggacggcctc
gtcgtctgcgcgaccgtggccttcgggatgggcgtcgacaagcccgacatccgctgggtc
gcacatgccgacctgccgaagtcgatcgagggctattaccaggagatcggccgcgcgggc
cgcgacggcgcgcccgccgatacgctcacgctctacggtcccgacgacatccgtctgcgc
cgcacccagatcgacgagggtctcgccccgcccgagcgcaagagcgccgatcacggacgg
ctcaacgcgcttctggggctggccgaggcgctcggatgccggcgggtgcagctgctgggc
tatttcggcgaggcggccgagccctgcggaaattgcgatctctgcgatcgtccgcccgag
accttcgatgcgaccgaggccgtgcgcatggcgctctcggcgatcctcaggaccgacgag
cggttcggcacgggccatctcatcgacatcctgacgggcaatccgaccgacaaggtgcgc
gagcgcgggcatgacgacctgccgaccttcggcgtcggtcgtgcgcacgacaagcggcac
tggcaggccgtgttccgccagatgatgggccgcgacctggtccggcccgatgccgaacgg
cacggcgcgctcaggatgacgcatgccgcgcggccgatcctgcgcggcgaggcggggatc
gagttgcgccgcgacgcgatcgcgcgccgcgaggggccggtgccgcgcgcgctggtcgcc
gaggaggacgcgccgcttctgtccgcgctgaaggcgcagcggcgcgcgctggccgaggcg
cagggcgttcccgcctatgtgatctttgccgaccgcacgctgatcgagatggccgagcgc
cgcccccggagcctcgacgagatggcgcggatctcgggcgtgggcgcggtgaagctcgac
cggttcggcgcgaccttcctcaaggttgtgacgggcgaggccgaggagatgcatcccgcg
cgccgcaagctcgcgggccgaccgcagggcgcgctctacgaccggctgatggaggcgcag
cagcgcctcgcgcgcggcgtggacggcaccgacaagccgctcagctgcgcgtcgaacacg
ctgagctggatcgccgagcgcaggcccgactcgatcgaggcgctggcacgcgcgccaggc
ctcagcgcgcccaagctcgaccggttcggccgtgccttcctcgacgccgtcgacgagggt
tga
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