Palleronia sp. LCG004: RVY76_16635
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Entry
RVY76_16635 CDS
T09465
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
plcg
Palleronia sp. LCG004
Pathway
plcg00630
Glyoxylate and dicarboxylate metabolism
plcg00680
Methane metabolism
plcg01100
Metabolic pathways
plcg01120
Microbial metabolism in diverse environments
plcg01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RVY76_16635 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
RVY76_16635 (fdhF)
Enzymes [BR:
plcg01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RVY76_16635 (fdhF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4_Nqo3
Fer4
Fer4_8
Fer4_10
Fer4_9
Fer4_18
Fer4_21
Fer4_6
Fer4_2
Fer4_17
Fer4_16
Fer4_4
TPP_enzyme_M
TetR_C_34
Motif
Other DBs
NCBI-ProteinID:
WOI58187
UniProt:
A0AAU0HWD3
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All DBs
Position
unnamed2:complement(58530..61358)
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AA seq
942 aa
AA seq
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MVTLTVDGAQVTVPAGTSIMRAASEASIQVPKLCATDMLDAFGSCRLCLVEIEGRNGTPS
SCTTPVAEGMVVRTQTDRLKKLRKGVMELYISDHPLDCLTCAANGDCELQDMAGAVGLRD
VRYDSVAEKGTHFQIRNTAGEHNPFYMPKDTSNPYFDYDPSKCIVCSRCVRACEEVQGTF
ALTIAGRGWDSRVSAGTSLDDMLSSDCVSCGACVQACPTATLVEKSVVEIGTPERSVVTT
CAYCGVGCSFEAQMRGDELVRMVPYKDGKANRGHSCVKGRFAYGYAEHSDRILSPMIRDR
IDEPWREVSWEEALGFAAKRLKGIQAEKGRRSIGVITSSRCTNEETYLVQKLARGVFLNN
NTDTCARVCHSPTGYGLGQTYGTSAGTQDFDSVEQTDVVLVIGANPTDGHPVFASRLKKR
LRQGAKLIVVDPRRIDLVKTPHVEAAHHLPLRPGTNVAVVSAMAHVIVTEGLQNQAYIDA
RCDTDAYADYAEFIADPRHSPEATEAITGVPAETLRQAARLYATGGRAAIYYGLGVTEHS
QGSTTVIGIANLAMLTGNVGIEGAGVNPLRGQNNVQGSCDMGSFPHELPGYRHVKNADVR
EIFESRWGVEIDPEPGLRIPNMFDAALEGSFGGLYCQGEDIVQSDPDTSHVVAALSAMDC
VIVQDLFLNETSNYAHVFLPGSSFLEKDGTFTNAERRINRVRRVMAPRATYADWEVTQML
AAAMGTDWGYTHPSEVMAEIAATTPSFAGVTYDLLEEKGSVQWPCNEAHPEGTPMMHVDG
FVRGKGRFIRTDYVATEERSGPRYPLLLTTGRILSQYNVGAQTRRTANVVWHDEDVLEIH
PHDAETRGVRDGDWVRIASRAGATTLRAKITDRVSPGVVYTTFHHPDTQANVVTTDNSDW
ATNCPEYKVTAVQVAPSNGPSDWQESYSDHADAARRITHAAE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgctcaccgtcgacggcgcgcaggtcacggtgcccgccggaacctcgatcatg
cgcgcggcctcggaggcctcgatccaggtgccgaagctctgtgcgaccgacatgctcgac
gcgttcgggtcctgcaggctctgtctggtcgagatcgaaggccgcaacggcacgccgtcg
tcctgcaccacgcccgtcgccgaagggatggtggtgcgcacgcagaccgaccggctgaag
aagctgcgcaagggggtgatggagctctatatttccgaccatccgctcgactgcctgacc
tgcgccgcgaacggcgattgcgagcttcaggacatggcgggggccgtgggcctgcgcgac
gtgcgctatgacagcgtggccgagaagggcacgcatttccagatccgcaacacggccgga
gagcacaacccgttctacatgccgaaggatacgtcgaacccctatttcgactacgacccg
tcgaaatgcatcgtctgctcgcgctgcgtgcgggcctgcgaggaggtgcagggcaccttc
gcgctaaccatcgcggggcgcggctgggacagccgggtctcggcgggcacgtcgctcgac
gacatgctgtcgtcggattgcgtctcctgcggggcctgcgtgcaggcctgcccgaccgcg
acgctggtggaaaagagcgtggtcgagatcggcacgcccgaacgcagcgtggtgacgacc
tgcgcctattgcggcgtgggatgttcgttcgaggcgcagatgcgcggcgacgagctggtg
cgcatggtgccctacaaggacggcaaggccaatcgcggccattcctgcgtcaagggccgc
ttcgcctatggctatgccgaacattcggaccgcatcctgtcgccgatgatccgcgaccgc
atcgacgagccatggcgcgaggtctcgtgggaggaggcgctcgggttcgcggcgaaacgc
ctcaagggcatccaggccgagaagggtcgccgctcgatcggtgtcatcacctcgagccgc
tgcacgaacgaggagacctacctggtccagaagctcgcgcggggcgtgttcctcaacaac
aataccgatacatgcgcgcgggtctgtcattcgccgaccggctatggcctcgggcagacc
tacggcacatcggccggaacgcaggatttcgactcggtcgaacagacggacgtggtgctg
gtgatcggggccaacccgaccgacgggcatccggtctttgccagccgcctgaagaaacgt
ctgcggcagggcgcgaagctgatcgtcgtggacccgcggcgcatcgatctggtcaagacg
ccgcatgtcgaggcggcccatcacctgccgctcaggcccggaaccaacgtcgccgtcgtc
tcggcgatggcgcatgtcatcgtgacggaggggctgcagaaccaggcctatatcgacgcg
cgctgcgataccgacgcctatgccgattacgcggagttcatcgccgatccgcgtcattcg
cccgaagcgaccgaagccatcaccggcgttccggccgaaacgctgcggcaggccgcgcgc
ctctatgcgaccgggggacgggcggcgatctattacgggctgggcgtgaccgagcacagc
cagggctcgaccaccgtcatcgggatcgcgaacctcgccatgctgaccggcaacgtcggg
atcgagggcgcgggggtgaacccgctgaggggccagaacaacgtgcagggctcgtgcgac
atggggtccttcccgcacgagctgccgggctatcggcacgtgaagaacgccgatgtgcgc
gaaatcttcgagagccgctggggcgtggagatcgaccccgagccgggcctccggatcccc
aacatgttcgacgccgcgctggaggggtcgttcggcgggctctactgccagggcgaggac
atcgttcaatccgacccggacacgagccacgtggtcgcggcgctttcggcgatggattgc
gtgatcgtgcaggacctcttcctcaacgagacgtcgaactacgcgcatgtcttcctgccg
gggtcgtccttcctcgaaaaggacgggaccttcaccaatgccgaacggcggatcaaccgg
gtgcgccgcgtgatggccccccgcgcgacctatgccgactgggaggtgacgcagatgctc
gccgccgcgatgggcaccgattggggctatacccacccgagcgaggtcatggccgagatc
gcggcgacgacgccgtccttcgcgggcgtgacctacgatcttctggaggagaagggatcg
gtccagtggccctgcaacgaggcgcatcctgagggtacgccgatgatgcatgtggatggc
ttcgtgcgcggcaaggggcggttcatccgcaccgattatgtcgcgaccgaggagcgcagc
gggccgcgatatccgctgctgctgacgacgggccgcatcctgtcgcaatacaatgtgggc
gcacagacccggcgcacggcgaatgtcgtctggcacgacgaggacgtgctcgagatccat
ccccacgatgccgagacccgcggcgtcagggacggcgactgggtgcggatcgcgtcccgc
gcgggggcgacgacgctgcgggcgaagatcaccgaccgggtgtcgccgggcgtggtctac
acgaccttccatcatcccgacacgcaggccaacgtcgtcacgaccgacaattcggactgg
gcgacgaactgtcccgaatacaaggtgacggcggtgcaggtcgcgccctcgaacgggccg
agcgactggcaggaaagctattccgaccacgcggatgcggcccggcgcatcactcacgcg
gccgaatag
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