Palleronia sp. LCG004: RVY76_18550
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Entry
RVY76_18550 CDS
T09465
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
plcg
Palleronia sp. LCG004
Pathway
plcg00521
Streptomycin biosynthesis
plcg00523
Polyketide sugar unit biosynthesis
plcg00525
Acarbose and validamycin biosynthesis
plcg00541
Biosynthesis of various nucleotide sugars
plcg01100
Metabolic pathways
plcg01110
Biosynthesis of secondary metabolites
plcg01250
Biosynthesis of nucleotide sugars
Module
plcg_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RVY76_18550 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RVY76_18550 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
RVY76_18550 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RVY76_18550 (rfbB)
00525 Acarbose and validamycin biosynthesis
RVY76_18550 (rfbB)
Enzymes [BR:
plcg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
RVY76_18550 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
NAD_binding_10
NmrA
adh_short_C2
Motif
Other DBs
NCBI-ProteinID:
WOI58383
UniProt:
A0AAU0HRR7
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All DBs
Position
unnamed4:102073..103110
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AA seq
345 aa
AA seq
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MKILVTGGAGFIGSAVVRRAIAEGHEVVNLDALTYAACLDNVASVADAPGYAFVQADLRD
PDALGRAFADHAPDAVLHLAAESHVDRSIDGPGIFVETNVTGTYNLLQAARAHWIERGRP
ESFRFHHVSTDEVFGSLGETGFFTEETPYAPNSPYSASKAASDHLVRAWGETYQLPVLLT
NCSNNYGPYHFPEKLIPVVILNALAHREIPVYGQGTNVRDWLYVEDHADALLTVLTRGKV
GRSYNIGGENEARNIDLVTTICGILDRLRPREAPYADLITHVADRPGHDQRYAIDPSRIR
DELGWRPSVTLEQGLEKTVQWYLDNENWWRALQDRQGVGERLGKS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgtcaccggcggtgccgggttcatcggatcggcggtcgtgcgccgcgcc
atcgccgaaggccacgaggtcgtgaaccttgacgcgctgacctatgcggcctgcctcgac
aacgtggcctcggtggcggatgcgccgggctatgccttcgtccaggccgatctgcgcgat
cccgatgcgctcggacgggcctttgccgatcatgcgcccgatgcggtgctgcatctcgcg
gccgaaagccacgtggaccgctcgatcgacgggccgggcatcttcgtcgagacgaacgtg
acgggaacctacaacctgctgcaggccgcacgcgcccattggatcgagcgcggccgccct
gaaagctttcgcttccaccacgtctcgaccgacgaggtgttcggctcactgggcgagacc
ggcttcttcaccgaagaaacgccctatgccccgaactcgccctattcggcgtccaaggcg
gcttcggaccacctcgtgcgtgcctggggcgagacgtatcagctgccggtgctgctcacc
aattgctcgaacaattacggcccctaccacttccccgaaaagctcatccccgtggtgatc
ctgaacgcgctggcccatcgcgaaatcccggtctacgggcaaggcacgaacgtgcgcgac
tggctctatgtcgaggatcacgccgacgcgctcctgaccgttctcacacgaggaaaggtg
gggcggagctacaatatcggcggcgagaacgaggcgcgcaacatcgatctggtgaccacg
atctgcgggatcctcgaccggctgcgcccgcgcgaggcaccttacgccgatctcatcacc
catgtggctgaccgccccggacacgaccagcgctacgcgatcgacccgtcgcgcatccgc
gacgaactcggctggcggccctcggtgacgctcgagcaggggctcgagaagaccgtgcaa
tggtatctcgacaacgagaattggtggcgcgcgctgcaagaccgccagggggtcggagaa
aggctcggaaaatcatga
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