Candidatus Portiera aleyrodidarum TV: PalTV_079
Help
Entry
PalTV_079 CDS
T02521
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pld
Candidatus Portiera aleyrodidarum TV
Pathway
pld03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pld00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PalTV_079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pld03019
]
PalTV_079
03009 Ribosome biogenesis [BR:
pld03009
]
PalTV_079
Enzymes [BR:
pld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PalTV_079
Messenger RNA biogenesis [BR:
pld03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PalTV_079
Ribosome biogenesis [BR:
pld03009
]
Prokaryotic type
rRNA helicases
PalTV_079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DeaD_dimer
CMS1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGI27077
UniProt:
A0A8D4BN66
LinkDB
All DBs
Position
complement(84485..85762)
Genome browser
AA seq
425 aa
AA seq
DB search
MSNFKKFALLPAVLKSIKVKGYENPSTVQLKTIPWLLEGRDLLGKAQTGTGKTAAFALPL
LTRIDINIKHTQVLVLAPTRELAQQVSLNFIRYGKYVKNIELITICGGQEYRDQVRGLNK
GAHIVVGTPGRVIDHLTRGSMNLKHLKALVLDEADEMLRMGFIEDVEIILKKMPITTQRV
FFSATVPFEIEPIVNRYLVNPVKIHIEYKKVTIIQRLCKIENNAKFEALARIIEIYKIDA
AIVFVRTRAYCSKLVEKLTTRSISAAALSGDLNQKLRDRTVSRLKLGKVNILVATDIAAR
GLDLPSITHVINYDIPNDKEAYIHRIGRTGRAGRTGIAITFVNRSELRKIKWLEKAIGQK
MEIPNEKALINHRDRIFKNRATAILASRNYNQRDLVQELVDKGFNPIELAAVFAHLAREK
EAKIG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattttaaaaaatttgctttattgccagcggttttaaagtctattaaagttaag
ggttatgaaaatccttccactgtacaactgaaaacaattccttggttacttgaaggacgt
gatttattaggtaaagctcaaacaggaacagggaaaacagcggcgtttgcattaccttta
ttaactagaatagatattaatattaaacatactcaggtattagtattagcacctactcgg
gaacttgcacaacaagtatctttaaattttattagatatgggaaatatgtaaaaaatatt
gaattaataactatatgtggtggtcaagaatatagagatcaagtacgtggtttaaataaa
ggtgctcatattgtagtaggtactccaggacgtgtgatagatcatttaacaagaggttct
atgaatttaaaacatctaaaggcactagtactggatgaagctgatgaaatgttacgtatg
gggtttatagaagatgtagaaataatacttaaaaagatgccaataacaacccaaagggtg
tttttttctgcaacggtaccattcgaaatagaaccaatagttaatcgttatttagttaat
cctgtaaaaattcatattgaatataaaaaagtaactattattcaaagattatgtaaaatt
gaaaataatgctaaatttgaagcattagcgcgtattatagaaatttataaaattgatgca
gcaattgtatttgtacgtactagagcttattgtagtaagttagtggaaaaattaactaca
cgtagtatatcagcagcagcactttctggtgatttaaatcaaaagttacgtgacagaacg
gtatctagattaaaattaggtaaagttaatatattagttgctacagatatagctgcaaga
ggacttgatttacctagtattactcatgtaattaattatgatataccaaatgataaagaa
gcatacattcatcgtattggtcgtacaggtcgtgcaggacgtacaggtatagctattact
tttgtaaatagaagtgaattacgaaaaataaaatggttagaaaaagctattggacaaaag
atggaaataccaaatgaaaaggcattaataaatcatcgtgatcgtatttttaaaaatcgt
gcaactgcaatattagcttctagaaattataatcaacgggatttagtacaagaattagta
gataaaggttttaatccgatagaattagcagcagtatttgcacatttagcacgtgaaaaa
gaggcgaaaattggataa
DBGET
integrated database retrieval system
