Candidatus Portiera aleyrodidarum TV: PalTV_087
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Entry
PalTV_087 CDS
T02521
Symbol
rpoH
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pld
Candidatus Portiera aleyrodidarum TV
Brite
KEGG Orthology (KO) [BR:
pld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pld03021
]
PalTV_087 (rpoH)
Transcription machinery [BR:
pld03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PalTV_087 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Fe_dep_repress
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AGI27081
UniProt:
A0A8D3X8F7
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Position
complement(91934..92764)
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AA seq
276 aa
AA seq
DB search
MIKIYPENNINGYIQTVIGIPLLSAKEEQDLAIRLRKKGDLEAARCLVMSNLRFVVHIAR
SYSGYGLQKSDIIQEGNVGLMKAVKRFDPDHGVRLVSFAIHWIKAEIHEYVLRNWRIVKV
ATTKSQRKLFFNLRSAKKRCNWLNNDEIKAIAKDLNVNPNVVREMEGRLSSQDYGFDNKQ
DEDFDKYQNPSNYIEDSRLDPAIQLEKYDFERYAYRRLYVALNKLDERVRDILKQRWLNE
QKATLHELASIYGVSAERIRQLEKSAIKKIKKYINR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatttatccagaaaataatataaatggttatattcaaacagttataggtatt
cctttactttcggctaaagaagaacaggatttagcgataagattaagaaagaaaggagat
ttagaagcagctcgttgtttagtaatgtctaatttacgttttgtagttcatattgctcgt
agttattcaggatatggattacagaaatcggatattattcaagaaggtaatgtagggtta
atgaaagcagtaaaacgatttgatcctgatcatggtgtacgtttagtttcttttgctata
cattggattaaagctgaaatacatgaatatgttttaagaaattggagaattgtaaaagta
gctactacgaaatctcaaaggaaattattttttaatttaagaagtgctaaaaaacgttgt
aattggttaaataatgatgaaatcaaagcaatagctaaggatcttaatgttaatcctaat
gtagttagagaaatggaaggtagattatcatcgcaagattatggatttgataataagcaa
gatgaagattttgataaatatcaaaatccttctaattatattgaagattcaagattggat
cctgctattcaattagaaaaatatgattttgaaagatatgcttatagacgcttatatgta
gctttaaacaaacttgatgaacgtgtaagagatattttaaagcaacgttggttgaatgaa
caaaaagcaacattacatgaattagcttcgatttatggggtatcagctgaaaggattcgt
caattagaaaaaagtgcaataaaaaaaattaaaaagtatattaacagataa
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