Candidatus Portiera aleyrodidarum TV: PalTV_273
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Entry
PalTV_273 CDS
T02521
Symbol
gyrB
Name
(GenBank) type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pld
Candidatus Portiera aleyrodidarum TV
Brite
KEGG Orthology (KO) [BR:
pld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pld03032
]
PalTV_273 (gyrB)
03400 DNA repair and recombination proteins [BR:
pld03400
]
PalTV_273 (gyrB)
Enzymes [BR:
pld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PalTV_273 (gyrB)
DNA replication proteins [BR:
pld03032
]
Prokaryotic type
DNA Topoisomerases
PalTV_273 (gyrB)
DNA repair and recombination proteins [BR:
pld03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PalTV_273 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
BESS
Motif
Other DBs
NCBI-ProteinID:
AGI27242
UniProt:
A0A8D4BNB3
LinkDB
All DBs
Position
247533..249785
Genome browser
AA seq
750 aa
AA seq
DB search
MSNYSYNSSNIKILKGLDPVKKRPGMYIGNIDDGTGLHHMFFEIIDNSIDEYLSGYCNKL
IIHIIHNKIITIEDNGRGIPIDIHSEGISAAEIIMTILHAGGKFDNKSYKISGGLHGVGL
SVVNALSEYMNLYIYRNHNIYKQIYLNGIPLNPLKVLGTTKKTGTKISFKPSKKVFINTH
FNDNIIYKRLQELSFLNNKLKIFLIQKEKKILLFNEGGIKAFIMLLNKKKNTICPIFYFK
SKTNNICIEIAIQWNNSYKEILKCYTNNIPQNDGGTHLLGFRTALTKTIKNYIENEKINN
KYNINSDDIKEGITAIIAIKMQNPKFSSQTKNKLISSEIKIAVDKELNKKFYHYLLEHPK
ESKNIINKIINSAKIRDSSRKAREIARKRIALDIAKLPGKLADCQEKNPDRAELYIVEGD
SAGGSAKQGRDRRIQAILPLKGKILNVEKSGFDKILLSKEIGTLITALGCGIGHKEFNIK
KLRYHTIIIMTDADVDGSHIRTLLLTFFFRYMPKIIEKGYIYIAKPPLFKIKHEKNERYI
KNEKELNTHTIKICLKEKTILINEKKINIKKLLFKYILIYNLSKKFKISNLKKLMIVKKI
EKNYLNDNFYKHKINVHQLNNKEFVKANHYLVLIKFKKQINKLNNFYNPIILLLKNQLFK
KFDKIYDLLEFIINNFLYKNINIQRYKGLGEMNPNQLWDTTMNPLKRRMFKINIQDIVKA
NLIFNILMGDNVKPRRKFIQTNALIATIDI
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattattcatataactcatctaatataaaaatattaaaaggtttagaccctgtt
aaaaaaagaccaggaatgtatattggtaatatagatgatggtactggtttacatcatatg
ttttttgaaattattgataattctattgatgaatatttatctggttattgcaataaactt
attattcatattattcataataagataataaccattgaagataatggaagaggtatacct
atagatatacattcggaaggaatatcagctgcagaaataatcatgactatcttacatgcc
ggaggtaaatttgataataaatcttataaaatttctggaggattacatggggtaggttta
tcagtagtaaacgctttatctgaatatatgaatttatatatttatagaaatcataatatt
tataaacaaatatatttaaatggtatacctttaaatccattaaaagttcttggaacaaca
aaaaaaacaggtacaaaaataagttttaaaccttcaaaaaaagtttttatcaatacccat
tttaatgacaatattatatataaaagattacaagaattatcttttttaaataataaatta
aaaatttttttaatacaaaaagaaaaaaaaatattattgtttaatgaaggtggaatcaaa
gcatttataatgctacttaataaaaagaaaaataccatctgtcctattttttatttcaaa
tccaaaaccaataatatttgtattgaaatagcaatacaatggaacaattcttataaagaa
atattaaaatgttataccaataatataccacaaaacgatggtggaactcatttacttgga
tttcgtacagcattaaccaaaaccataaaaaattatattgaaaatgaaaaaataaacaat
aaatataatatcaatagtgacgatataaaagaaggaattacagcaataatagcaataaaa
atgcaaaatccaaaattttcttcacaaactaaaaacaaattaatttcatctgaaataaaa
atagcagtagacaaagaattaaataaaaaattttatcattatttattagaacatcctaaa
gaatcaaaaaacattataaataaaattattaattctgcaaaaataagagattcatctcgt
aaagcaagagaaatagctcgaaaaagaattgctttagatattgcaaaattaccaggcaaa
ttagcggattgtcaagaaaaaaatccagacagagctgaattatatatagtagagggcgat
tcagcaggtggttcagctaaacaaggtcgagatcgacgtatacaagctattttaccttta
aaagggaaaatacttaatgtagaaaaatctggatttgacaaaatccttttatcaaaggaa
ataggcactttaataaccgcattaggttgtggaataggacataaagaatttaatataaaa
aaattacgttatcatacaatcataataatgaccgacgcggatgttgatggttcacatata
agaaccttattattaacatttttctttagatatatgccaaaaattattgaaaaaggttat
atatatatagcaaaaccacctttatttaaaattaaacatgaaaaaaacgaaagatatata
aaaaatgaaaaagaattaaatacccatacaataaaaatatgtttaaaagaaaaaacaatt
ttaattaatgaaaaaaaaataaatataaaaaaattactttttaagtatattcttatttat
aatctttcaaaaaaatttaaaataagtaatttaaaaaaattaatgattgtaaagaaaata
gaaaaaaattatttgaatgataatttttataaacacaaaataaatgtacatcagttaaat
aataaagagtttgttaaagctaaccattatttagtgttaatcaaatttaaaaaacaaata
aataaattaaataatttttataatccaattattttattattaaaaaatcaattatttaaa
aagtttgataaaatttatgatttactagaatttattataaataattttttatataaaaat
attaatatccaaagatataaaggattaggagaaatgaatcctaatcaattatgggacact
acaatgaacccattaaaaagaagaatgttcaaaatcaatattcaagacattgttaaagcc
aatttaatttttaatatattaatgggtgataacgtaaaacctagaagaaaatttatccaa
accaatgcattaattgctactattgatatttaa
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