Candidatus Portiera aleyrodidarum BT-B-HRs: B186_133
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Entry
B186_133 CDS
T02206
Symbol
rpoD
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ple
Candidatus Portiera aleyrodidarum BT-B-HRs
Brite
KEGG Orthology (KO) [BR:
ple00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B186_133 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ple03021
]
B186_133 (rpoD)
Transcription machinery [BR:
ple03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B186_133 (rpoD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AFQ24095
LinkDB
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Position
147896..149632
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AA seq
578 aa
AA seq
DB search
MFEILELNIKELINKGKEQGFLINSEICELFDNEKVDEIICIVKDKGINIIDKISEVENI
YKNVEDKNICKKENDIRHFDPVRIYMREMGKIDLLDRKGEIEIAKKIEEGTKEIMAALVY
LPGAVDYVLEIYDLIIKDTEVNFYDLFTGFMYFKKVKKEEKLKAKNNVLISETYNEGPDH
ILTKNLFEKIRKQNKQVKINVLTYGYKSKEAKMELKLLSKYFSKIKFLPKHFEGLLSKVR
LSIKNIRFHENLILKYMVKMVKLSRKEIINSFIGNEANLKWLDKFILNTEKTISRKNYRS
NILKSQKKILLEQQQINLSVVELKEINRKLLIGEYKAHKAKQELIEANLRLVISIAKKYT
NRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVH
MIETINRLKRLSRKMLQERGIEPTPEELSNRLEISENKIRKILKIAKEPVSIETPIGEDE
DYYLSDVIEDNITASPIDAATDEGLVEATRNVLSELTAREAKVLRMRFGIDMSTDHTLEE
VGKQFDVTRERIRQIEAKALRKLRHPSRSEALRSFLEE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaatattagagttaaatataaaagagttaattaataaaggtaaagaacaagga
tttttgataaattcagaaatttgtgagttgtttgataatgaaaaagtagatgagatcata
tgtatcgttaaagacaaaggaataaatatcattgacaaaatatcagaagtagaaaatatt
tataagaatgttgaagacaaaaatatttgtaaaaaagaaaatgatattcgtcattttgat
cccgtgcgaatatatatgagagaaatgggaaaaatagatttattagatagaaaaggtgaa
atcgaaatagcaaaaaaaatagaagaaggtacaaaagaaattatggcagcgctagtatat
ttaccgggagcagttgattatgtattagaaatttatgatttaataataaaagatacagaa
gtaaatttttatgatttgtttactggttttatgtattttaaaaaagttaaaaaagaagag
aaattaaaagcaaaaaataatgtattaattagtgaaacgtataatgaaggaccagatcat
atattgacaaaaaatttgtttgaaaaaattcgtaaacaaaataaacaagtaaaaataaac
gtgttaacatatggttataagtcaaaagaagcaaaaatggaattaaaacttttatcaaag
tacttttcaaaaataaaattcttgccaaaacattttgaagggttgttaagtaaggtacgt
ttaagtataaaaaatataagatttcatgaaaatttgatattaaaatacatggtaaagatg
gtaaagttatcaagaaaggaaattataaatagttttataggtaatgaagcaaatttaaag
tggttagataaatttatattaaatacagagaaaacaattagtagaaaaaactatagaagt
aatattctaaaatcacaaaaaaaaatattattagaacaacaacaaataaatttatcggtt
gttgaattaaaagaaataaatcgaaagttgttaataggagaatataaggctcataaagca
aaacaagaattgattgaagctaatttgagattagtaatttcaattgcaaaaaaatataca
aatcgtggattacaatttttagatttaattcaagaaggtaatataggtttaatgaaagca
gttgataaatttgaatatcgcagaggatataaattttctacatatgctacatggtggata
cggcaagcaataacgagatcaatagctgatcaggcaagaacaataagaataccagtacat
atgatagaaacaataaatagattaaaaagattatcaagaaaaatgttgcaagaaagaggc
atagaacctactccggaagaattaagcaatcgacttgaaatttcagaaaataaaataaga
aaaattttgaaaattgcaaaagaacctgtttctattgaaacaccaataggggaagatgaa
gattattatttaagtgatgtgatagaagataatattacagcatcacctatagacgcagca
acagatgaaggattagtggaagcaacaagaaatgtattaagtgagttaacagctagggaa
gcaaaagttttaagaatgagatttggaatagatatgtctacagatcatacattagaagag
gtaggtaagcaatttgatgtaacgcgtgaaagaattcgtcaaatagaagcaaaagcattg
cggaaattaaggcatccatcacggtcagaagctttaagatcatttttggaagagtag
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