Candidatus Portiera aleyrodidarum BT-B-HRs: B186_177
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Entry
B186_177 CDS
T02206
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ple
Candidatus Portiera aleyrodidarum BT-B-HRs
Pathway
ple03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ple00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B186_177 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ple03021
]
B186_177 (rho)
03019 Messenger RNA biogenesis [BR:
ple03019
]
B186_177 (rho)
Transcription machinery [BR:
ple03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
B186_177 (rho)
Messenger RNA biogenesis [BR:
ple03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B186_177 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
OB_RNB
AAA
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AFQ24134
LinkDB
All DBs
Position
complement(206696..207946)
Genome browser
AA seq
416 aa
AA seq
DB search
MNLNELKKQNVHELLKIASSMNVENILRSKKQDIIFAILKKQAKGGEDIYGEGVLDVLQE
GFGFLRSSDSSYQPGPSDIYVSPSQIRRFNLRKGDSIYGKIRPPKDGERYFALLKVNKIN
FDRIETVKQKILFENLTPLFPTYRLIMDGSTDDLTARILDLVAPIGKGQRGLIVSPPKAG
KTMMMQNIANSIVRNSPECYLIFLLIDERPEEVTEMSRTVIGEVIASTFDEPPTRHVQVA
EMVIEKAKRLVEHKKDVVIMLDSITRLARAYNTVVPSSGKILTGGVDSNALEKPKRFFGV
ARNIEEGGSVTILASALIDTGSKMDDIIFEEFKGTGNMEAHLDRKLAEKRVFPAINIRRS
GTRREDLLCSEEEIQRMWILRKILHSMEDVEATELLIDRLKTTKNNIEFFESMKRR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaatgaactaaaaaaacaaaatgtacatgaattgttaaaaatagcaagttct
atgaatgtcgaaaatatattacgttctaaaaaacaagatattatttttgcgattctaaaa
aaacaagctaaaggcggagaagatatatatggagaaggagttttagatgttttacaagaa
gggtttggttttttaagaagctctgatagttcgtaccaaccaggtccttctgatatatat
gtgtctccatcacaaattagacggtttaatttacgtaaaggtgatagtatttatgggaaa
atacgtccaccaaaggatggtgaaagatattttgctttattaaaagtaaataaaataaat
tttgatagaatagaaactgttaaacaaaaaattttatttgaaaatttaacgccattattt
ccaacttatagattaataatggatggttcgactgatgatttaacggcaaggattttagat
ttggtagcaccgattgggaaagggcagagaggtttaattgtttcacctccaaaagctgga
aaaactatgatgatgcaaaatatagctaattcaatagtacgtaacagtccagaatgttat
ttaatttttttattaattgatgaacgtcctgaagaagtaacagaaatgtctagaacagta
attggtgaagttattgcttcgacatttgatgaaccacctactagacatgtacaagtagct
gaaatggttatagaaaaagcaaaaagattggttgaacataaaaaagatgtagtcataatg
ttagattctattactagattagcaagagcttataacacagtagttccttcatctggaaaa
attttaacagggggagtagattcaaatgctcttgaaaaaccaaaaagattttttggtgta
gcacgtaatatagaagaaggtggaagtgtaactattttagcatcagcgttaatagatact
ggatcaaaaatggatgatataatttttgaagaatttaaaggtacaggtaatatggaagca
catttggatcgtaaactagctgaaaaaagagtgtttcctgcaataaatattagacgctca
ggtacacgtagagaagatttattatgtagtgaagaagaaatacaacgtatgtggatttta
cgcaaaatattacatagtatggaggacgtagaggcaacagagttattaatagatagattg
aaaactactaaaaataatatagaattttttgaatcaatgaaaagaagataa
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