Platalea leucorodia (Eurasian spoonbill): 309587748
Help
Entry
309587748 CDS
T12103
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
plec Platalea leucorodia (Eurasian spoonbill)
Pathway
plec04512
ECM-receptor interaction
plec04514
Cell adhesion molecule (CAM) interaction
plec04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plec00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
309587748 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
309587748 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
309587748 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plec04131
]
309587748 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
plec04090
]
309587748 (SDC1)
00535 Proteoglycans [BR:
plec00535
]
309587748 (SDC1)
Membrane trafficking [BR:
plec04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
309587748 (SDC1)
CD molecules [BR:
plec04090
]
Proteins
309587748 (SDC1)
Proteoglycans [BR:
plec00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
309587748 (SDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
309587748
NCBI-ProteinID:
XP_082162318
LinkDB
All DBs
Position
3:complement(117285024..117311259)
Genome browser
AA seq
309 aa
AA seq
DB search
MRKVVAVWLVALCFQAAVPQTTNLNLPPEDLDSSGDDDDAFSGSGIAPLADQTRTWRAPG
ESTNSSLLATPMDFNEQPFSRIESQTEKDVVSPSATSTVVTEEPVVAVKDEVPVLGLPDE
KPTNDAVTTTVRSPTTRFPSVVHVTPSEASGTVHVLEPKNPISDVPDTKDVPEPHSTIHH
EGDVTATPTTTAPEDVVPTHEEVSEDGSGDPGDFILTKDDDLVPTRNSEVPADSGRNAKA
AGASGIMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQK
PHKQEEFYA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggtggtggccgtgtggctggtggccctttgcttccaggctgccgtcccgcaa
actacaaatctgaaccttcctcctgaagatcttgattcatctggtgatgatgacgacgcg
ttctcaggttcaggtatagctcccctggctgaccagactcgcacctggagagccccagga
gaatcgactaattcctcattactggcaacaccaatggatttcaacgagcagccattttcc
aggattgagagccaaactgaaaaggatgtagtatctccttctgcaactagtactgtagtg
acagaggagccagttgtagctgtgaaggatgaagtacccgtcctgggcttacctgatgag
aaaccaacaaatgatgcagttacaacaacagtgagaagccccactactcgctttccttca
gtggttcatgtaactccttcagaagcctcaggcacagtccatgtgctcgaacctaaaaac
cctatatctgatgtgccagacactaaagatgtgcctgagccccactctaccatccatcat
gagggagacgtcaccgccacccccacgacaacagctccagaggacgttgttcctacacat
gaggaggtttctgaagacggctctggagacccgggagacttcatcttgactaaagatgat
gatttggtccccacccggaactcggaagtaccggctgactctgggaggaatgccaaagca
gcaggagcctcaggaattatggacagaaaagaagtacttggaggtgttattgctggagga
ctagtaggcttggtgtttgcagtgtttctagttgcatttatgctgtacagaatgaagaaa
aaagacgaaggcagctattcactggatgaaccaaagcagtctaatggaggataccaaaaa
ccacacaaacaagaagaattctatgcataa
DBGET
integrated database retrieval system
