KEGG   Platalea leucorodia (Eurasian spoonbill): 309593709
Entry
309593709         CDS       T12103                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
plec  Platalea leucorodia (Eurasian spoonbill)
Pathway
plec03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:plec00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    309593709 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plec03400]
    309593709 (TDP1)
DNA repair and recombination proteins [BR:plec03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     309593709 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 309593709
NCBI-ProteinID: XP_082174801
LinkDB
Position
7:complement(19785680..19838157)
AA seq 607 aa
MLQEGAHGKWTVSSSDESTEENSDSEKPSTSLLSDAARSRTREPQYPCSEARKAAHKRKA
SPLKLSDKKTSTEIPPAEKQRTSQEGLGWCLSSSDEEPEDQEKHAHKETLKEEKCDAPKE
HPLNLCKDDELSENQKAEEYDETLSETQDTWDLLNGGNPFRFFLTKVRGIEQSYNSGALH
IKDILSPLFGTLISSAQFNYCIDVGWLVRQYPQEFRKKPLLIVHGEKRESKAELLAQARP
YENISFCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIAEDWHQKTQGIWLSPLYPR
LPQGSSDSAGESETNFKSDLTSYLMAYNSPALKEWIDLIQEHDLSETRVYLLGSTPGRYQ
GSDKEKWGHLRLRKLLKEHASTIPARESWPVVGQFSSIGSMGADGSKWLCSEFQESLVAA
GSSVTTLLKCDVPIHLVYPTVNNVRQSLEGYPAGGSLPYSIQTAQKQLWLHSYFHKWSAE
ISGRSHAIPHIKTYMRPSPDFQKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLF
LPSAFGLDKGYFHVRGKMLSESNDSATYFPVPYDLPPEQYGSKDQPWIWNIPYTNAPDTH
GNMWVPS
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgcttcaggaaggcgcacacggaaaatggacagtatctagcagtgatgaaagtactgag
gaaaattctgacagtgaaaaaccatctacatctttgctatcagatgctgcacgtagcaga
acacgcgagccacaatatccatgctctgaagctaggaaggctgctcacaagagaaaagct
tctcccctgaagctcagtgataaaaaaacttctacagaaatacctccagcagaaaaacag
agaactagccaagaaggcttaggctggtgtctttctagtagtgatgaagagcctgaagat
caggaaaagcatgcccacaaagaaacactgaaagaagaaaaatgtgatgcacccaaagaa
catcctctgaatctttgcaaagatgatgaactctcagagaatcagaaagcagaggagtac
gatgaaacactcagtgaaacccaagatacctgggatttgttgaatggaggaaaccctttc
aggttttttctcactaaagtcagaggaattgaacagagctataattctggagccctgcac
ataaaagatattttgtctcctctttttgggactctcatatcttctgcccagtttaactac
tgtatagatgtgggatggcttgtaagacagtatccacaggaattcaggaagaagccattg
ttgatagttcatggtgaaaagagagaatccaaagctgaactgcttgcacaagcacgccct
tatgagaacattagcttttgtcaggctaaactggatattgcatttggaactcaccatacg
aaaatgatgttgttgttatacgaagaaggtcttcgagttgtgatacatacatccaatctt
attgctgaagattggcaccagaagactcagggaatatggctaagccctttatatccaagg
ctacctcagggatcaagtgattctgctggtgaatctgaaactaattttaaatctgaccta
acaagttacttgatggcttacaattcccctgcgcttaaggaatggatagatctgattcaa
gaacatgatttatcagagaccagagtgtatctgcttggttctacccctggacgatatcaa
ggtagtgataaagaaaagtggggtcatcttaggctcagaaagcttttgaaagagcacgct
tcaacaataccagcacgggaatcctggcctgttgttggtcagttctcaagcattggttca
atgggagctgatgggtccaaatggctgtgctcagagttccaggagagcctggtggctgcg
ggcagcagtgtcacaactctccttaaatgtgatgttccaattcacttggtttatcctact
gtgaacaatgtgagacaaagtctggaaggctatcccgctggtggctcacttccatacagt
atacagacagcacagaaacagctgtggttgcattcctattttcacaaatggtcagcagaa
atctcgggtcgaagtcatgctatacctcacattaagacatacatgagaccctctcctgac
ttccagaagattgcatggttcttagttacaagtgccaatctctctaaggcagcttgggga
gctctggagaaaaatggtacccaactgatgattcgttcttatgaacttggagtccttttc
ttgccttcagcatttggattggataaaggttactttcacgtgagagggaaaatgctttca
gaaagtaatgattcagcaacatattttcctgtaccttatgacctgccaccagaacagtat
ggaagcaaagatcaaccgtggatctggaatattccttacactaacgcccctgatacacat
ggaaatatgtgggttccatcgtga

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