Platalea leucorodia (Eurasian spoonbill): 309593930
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Entry
309593930 CDS
T12103
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform 1
KO
K17890
autophagy-related protein 16-1
Organism
plec Platalea leucorodia (Eurasian spoonbill)
Pathway
plec04136
Autophagy - other
plec04140
Autophagy - animal
plec04145
Phagocytosis
plec04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
plec00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
309593930 (ATG16L1)
04140 Autophagy - animal
309593930 (ATG16L1)
04136 Autophagy - other
309593930 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
309593930 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plec04131
]
309593930 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
plec03029
]
309593930 (ATG16L1)
Membrane trafficking [BR:
plec04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
309593930 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
309593930 (ATG16L1)
Mitochondrial biogenesis [BR:
plec03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
309593930 (ATG16L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
ATG16
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR3_2nd
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EIPR1
CFAP251_N
Beta-prop_VPS8
NBCH_WD40
Beta-prop_IFT140_1st
eIF2A
Beta-prop_NOL10_N
Beta-prop_ACSF4
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_WDR41
Tricorn_2nd
ASA1
ZapB
INO80F
Fez1
HEF_HK
Nucleo_P87
HTH_6
DUF8181
PALB2_WD40
Tricorn_N
AP5B1_middle
CCDC93_CC
FUSC
DUF6383
FKBP15
V_ATPase_I
CLIP1
Motif
Other DBs
NCBI-GeneID:
309593930
NCBI-ProteinID:
XP_082175219
LinkDB
All DBs
Position
8:complement(27233116..27256751)
Genome browser
AA seq
608 aa
AA seq
DB search
MASGLRAAGFPPWKRHIAAELRRRDRLQRQAFEEIIGQYNKLLEKSDLHAVLADKLQAEK
YDMQSRHEISPGHDGTWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQK
DKEMQMNEAKIAEYLQKISELETECQELRSKLQDLERANQTLKDEYDALQITFNALEEKL
RKTTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPRDDD
IEVLADETSDTAEETSPVRAVSRTSSKRLSQPAGGLLDSITNIFGRRSLSSFPAPQDNVE
PHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPK
GSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLD
NARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRTE
SIVKELELLGRITALDLNSERTELLTCSRDDLLKIIDLRVSAVKQTFSAQGFKCGSDWTR
VVFSPDGNYVAAGSADGALYIWNVLTGKLERTLAKHHSSSINAVAWSPAGAHVVSVDKGN
KAVLWSEF
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggggctgcgcgccgccggtttccccccctggaagcggcacatcgcggcggag
ctgcggcggcgggaccggctgcagcggcaggccttcgaggagatcatcgggcagtataac
aagctactagagaagtctgaccttcatgcagtgctggctgataagcttcaagcagaaaaa
tatgacatgcagagcagacatgagatcagtccagggcatgatggcacatggaatgatgct
cagttgcaggaactggcacagctgaagataaagcatcaagaggagctgacagagctgcat
aagaaacgtggcgagttggcccagtctgtaattgatctgaataaccaaatgcagcaaaag
gacaaagagatgcagatgaatgaagcaaagattgcagagtatttgcaaaagatctctgaa
ctggaaacagagtgccaggaattgcgtagcaaactgcaagatcttgagcgagctaatcag
acattgaaagatgaatatgatgctctccagatcaccttcaatgccttggaggagaaactg
aggaaaactactgaagacaaccaggagctggtctcacgttggatggcagagaaagcacaa
gaagccaatcgtttgaatgcagaaaatgaaaaggattcgaggagacgacaagccaggctg
cagaaggagctagcagaagctgccaaagaacccctgcctgttgaacccagggatgatgat
attgaagtgcttgcagatgaaacctctgacacagctgaggagacatctccagtacgagct
gtcagccgaacatccagtaagcgactctcccagccagctggaggccttctggactctatc
actaatatctttgggaggcgttctttgtcctcattccctgctccccaggataatgtagag
ccacatccaggtgccagtaaagaagtgagagtgcccactactgccatatgtgtctttgat
gcacatgatggggaggtgaatgcagtgcagttcagccctggctcccggttactagcaaca
ggaggcatggaccggagggttaagctttgggaagtcttgggagataggtgtgagcccaag
ggttccctctctggtagtaatgctgggattacaagcatagaatttgatagtgctggttct
tacctcttagcagcttcaaatgactttgccagcagaatctggacggttgatgacaatcga
ttacggcacaccctgacaggtcacagcggtaaagttctgtcagccaagttcttgctggac
aatgcacgcattgtttcgggaagtcatgaccggaccctcaagctctgggacctccgcagc
aaagtttgtataaaaacagtgtttgcaggatctagctgcaatgacatcgtatgtactgag
caatgtgtaatgagtggacattttgataagaaaattcgtttctgggacatcaggactgaa
agcatagtaaaagaactggagctgcttggaagaatcacagctctggacctgaactcagag
cgaacagagcttttgacctgttcccgtgatgatctactaaagatcattgatctgcgggtt
agtgctgtcaagcagacattcagcgcccagggattcaaatgtggttctgactggacgaga
gttgtgttcagtcctgatggtaactatgtggctgctggttcagctgatggggccctctac
atttggaatgtgctcactgggaaattggagaggacacttgcaaagcatcacagttcttct
atcaatgcagtcgcatggtcaccagcgggtgcccatgttgtcagtgtggacaaaggaaac
aaggctgtcctgtggtctgaattttga
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