KEGG   Platalea leucorodia (Eurasian spoonbill): 309599545
Entry
309599545         CDS       T12103                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform 1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
plec  Platalea leucorodia (Eurasian spoonbill)
Brite
KEGG Orthology (KO) [BR:plec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:plec03036]
    309599545 (KDM4B)
Enzymes [BR:plec01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     309599545 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     309599545 (KDM4B)
Chromosome and associated proteins [BR:plec03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    309599545 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141
Other DBs
NCBI-GeneID: 309599545
NCBI-ProteinID: XP_082187200
LinkDB
Position
21:complement(3661704..3754595)
AA seq 1117 aa
MGSENPSPQNPGCKIMTFRPTLEEFRDFGKYIAYIESQGAHRAGLAKVIPPKEWKPRKTY
DDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDADVAEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRVLQPERYDLWKQGKDIAVLDHMKPTALTSPELDAWNE
TKAELKAKLLRRIGDEEEDNKHRSHRKRSQPRRHKTEDQKSLGDVMAIETALEDVKVKEE
LKRGPDLEEEERSKAIEGGEGDCKVKARPPKVKGERKKKHLFHQHQHHLQAPQPPLQQQQ
PPLPPPPAPQQQLAEDEAPAARPPVPPAVPTSSTAEKSLPPAPLNIVQPSEAPVEEDDFK
PRPIIPMLYVVPRTKKVVFDKERMSCQQAFEQFATQKSPSWREQTVPMEIPVKEEENAEA
ENTEVATEVSDLQTASAFSKMKMEIKKSRRHPLGKPPTRSPLSVVKQETSSDEETFPFSG
EEDMSDPEALKSLLSLQWKNKAHNFPAERKFNAAAALSEPYCAVCTLFYPYNQSLQMDKE
AVPVSVGETTSFVHLSKCGQKTKPLIPEMCFTSSGENTEPLPSNSYIGEDGTSPLISCAK
CCLQVHASCYGIRPDLVNESWSCSRCSANAWAAECCLCNLRGGALQMTTDGRWIHIICAI
AVPEARFLNVIERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTSFHVTC
AHAAGVPMEPDDWPYVVSITCFKHKAANQNIPFRREVTLGQTVITKNRNGLYYRCKVIGM
TTQTFYEVNFDDGSYSDNVYPESIISRDCIQLGPPPEGELVQLQWTDGIIYKAKFIAAQI
SQIYQVEFEDGSQLMVKRGDIYTLEEELPKRVKSRLSLSTGAPQEDVFSGDEVRAAKRPR
LGNSRNPEEYGQNPDYLAFMESLLQTQYQPGTQSNMF
NT seq 3354 nt   +upstreamnt  +downstreamnt
atggggtcggaaaacccaagtccgcagaaccctggctgtaagatcatgacctttcgtccc
acgcttgaagagtttcgggactttgggaaatacattgcttacattgaatcgcaaggagct
caccgagcggggcttgccaaggtgattcctcccaaggaatggaagccccgaaaaacttac
gatgacatagatgacatggttatcccagctcctattcagcaggtggttactggacagtcg
gggctattcacccagtataatatacagaagaaacccatgactgtgggagaataccggcgt
ctggctaatagtgagaagtattgtactccacgccatcaagattttgaagacttggagcgc
aagtactggaagaacctcacgtttgtctcaccgatttatggggctgatatcagtggctca
ctatatgatgcagatgtggcagaatggaatattggcaatctgaacaccctcttagacatg
gtggaacatgagtgtggcattatcatagaaggtgtaaacactccctacctctactttggg
atgtggaagacaacatttgcttggcatacagaggatatggatctctacagtatcaactac
ttgcattttggggagccaaaatcttggtatgccatacctccagaacatggcaagagattg
gaacgcctggcgaaaggattttttccaggaagctctcagggatgtgatgctttcctccgt
cacaagatgaccctcatttcaccctcaatcttgaagaagtatggtattccttttgaccgg
atcacccaggaagccggagagtttatgattacatttccttacggttaccatgctggcttc
aatcatggcttcaactgtgctgagtctaccaactttgccactttgcgatggattgactac
ggaaaaatggcaacccaatgtacttgccgcaaagacatggtgaagatttccatggatgtc
tttgtgagggttctgcaaccagaacgttacgatttatggaaacaaggaaaagacattgct
gtcctggaccatatgaaacccacagctctgactagcccagaactagatgcctggaatgag
acgaaggcagagttgaaggctaaattgcttcgcaggataggagatgaggaagaggacaac
aaacaccggtctcacagaaaaagaagtcaacccagaagacataaaacagaggatcagaag
tctcttggggatgtcatggctatcgaaacagccttggaagatgtgaaagtaaaagaggag
ctgaaaagagggccagatctagaggaagaggagaggagcaaagcgattgagggcggagaa
ggtgactgcaaagtaaaggcccgtcctccgaaagtaaaaggtgagaggaagaagaagcac
cttttccatcaacaccagcaccatctgcaagcgcctcagccccctctgcagcagcagcag
ccaccgctgccaccgccgcctgcaccacagcagcagctggcagaggacgaggcgccagca
gcacggccaccagtacccccagcagtacccacgtcgtccacagcagagaagagcttgccc
ccagctcccctgaacattgtccagccctcggaggcaccagttgaggaagatgacttcaaa
cctcggccgatcattcccatgctttacgtggttccacggaccaaaaaggtggtgtttgac
aaggagcgcatgtcctgccagcaggcgtttgagcagtttgccacgcaaaagagtccgagt
tggcgggagcagacggtccctatggaaatccctgtgaaggaggaggagaatgcagaagca
gaaaataccgaggtcgctacagaggtcagtgatttacagactgcttctgctttttcaaaa
atgaagatggagataaaaaagagtcgtcgtcatccactgggcaaaccaccaacccgctcc
ccgttgtcggtggttaaacaggagacctcaagcgatgaggaaacatttccattttctggg
gaggaagatatgagtgacccagaggctttgaaatctttactttccctccagtggaagaat
aaagcacataatttcccagctgaaagaaaattcaatgcagctgctgccctgagcgagcca
tactgtgctgtctgtaccctcttttacccgtataaccagtccttacagatggataaagaa
gctgtcccagtctctgtaggagagaccacctctttcgtccacctttctaagtgcggacaa
aagaccaagcctctgatcccggagatgtgctttacctcaagtggagaaaacacagagccc
cttccttcgaattcatatattggagaggatggaaccagtcccttgatatcctgtgccaaa
tgctgcctgcaggttcatgctagctgttacggaatacgtccagacttggtgaacgagagt
tggtcttgctcgcggtgctcagccaatgcatgggcagcggaatgttgcctgtgtaatctc
aggggaggagctcttcagatgaccactgatgggcggtggatccatataatctgcgctatt
gctgtccccgaggcccgttttctcaatgtaatagagcgtcatcctgtggatatcagtgct
attccagagcagagatggaaactgaaatgtgtgtactgtcggaaacggatgaagaaagtg
tcgggtgcctgcatccagtgctcgtacgagcactgctccacatccttccacgtgacctgt
gcccacgcagccggcgtgcccatggagccggatgactggccctacgtggtgtccatcact
tgcttcaaacacaaagcggctaaccagaatattccgtttcgaagggaggtgacccttgga
cagactgtgatcacaaagaaccggaatggactctactacagatgtaaagtgattggcatg
acaacgcagactttctatgaagtaaactttgacgacggttcctacagtgacaacgtttac
ccagaaagcattattagcagagactgcatccagttgggaccccctccagagggtgagttg
gttcagctgcagtggacggatgggatcatctataaggccaagttcattgcagcccagatc
agtcagatttaccaggtcgagtttgaagatggttcccaactaatggtaaagcgtggtgat
atttataccttggaggaagagcttcccaagagagtgaagtctcgcctgtccctcagcacc
ggggcccctcaggaagatgtattttcgggagatgaagtgagagcagccaagcgcccccgg
ctggggaattcaagaaatcccgaagaatacggacaaaacccagattacttggcctttatg
gagagcctgttgcagacacagtaccagcctggaactcagagcaacatgttttaa

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