Platalea leucorodia (Eurasian spoonbill): 309601445
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Entry
309601445 CDS
T12103
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform 1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
plec
Platalea leucorodia (Eurasian spoonbill)
Pathway
plec04120
Ubiquitin mediated proteolysis
plec04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
plec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
309601445 (SYVN1)
04120 Ubiquitin mediated proteolysis
309601445 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plec04121
]
309601445 (SYVN1)
Enzymes [BR:
plec01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
309601445 (SYVN1)
Ubiquitin system [BR:
plec04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
309601445 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
U-box_ZFPL1
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
zf-RING_Vps41
FAR1_N
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
309601445
NCBI-ProteinID:
XP_082190587
LinkDB
All DBs
Position
34:complement(190903..202253)
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AA seq
600 aa
AA seq
DB search
MLYTAVVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVNHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSIDLQNENPWDSKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQPPPEPPEQAPPPPQTPQVP
QPPNFPQGILPPFPPGMFPFWPPVGPFPPVPGVQPPNSAENAAPSSGAASAARPGDAANA
GSEAAAAGTVPGLPFPPPWMGMPWPPLFGFPPMPVPPAGFAGLTEEELRAMEGHDRQNLE
ARLQCLQNIHTLLDAAMVQINQYLTVLATIGSPRPAAPRPPSARETPAEEPAPLRSPGSP
SAPAAAADPAAPAGAEGFTAEEEEEDEDGGEGSSSLDEPDTAELRRRRLQKLASPPAASH
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgctctacacggcggtggtgatggcggggagcctggcgctgacgacggcagtggtggct
cacgcctattacctcaagcaccaattctaccccaccgtggtttatctcaccaaatccagc
cccagcatggccgttctctacatccaagccttcgtgttggtttttcttctgggtaaattt
atgggcaaggtgtttttcgggcagctgcgagcagcggagatggagcacctgctcgagcgg
tcgtggtacgccgtgaccgagacctgcctggccttcaccgtcttcagggacgacttcagc
ccccgcttcgtcgccctcttcaccctcctcctcttcctcaagtgcttccactggttggcc
gaagaccgggtggactttatggaaaggagccccaacatctcctggctcttccacttccgt
atcgtctccctgatgttcctcctgggaatcctggatttcctcttcgttaaccacgcgtac
cacagcatcctcacgcgaggagcctccgtccagctcgtcttcggcttcgagtacgccatc
ctcatgaccatggtgctcaccatcttcatcaagtacgtcctgcactccatcgacctgcag
aacgagaacccttgggacagcaaagccgtctacatgctgtacacggagctcttcacgggc
ttcatcaaagtcctcctctacatggccttcatgaccatcatgatcaaagtccacaccttc
ccgctcttcgccatccgccccatgtacctggcgatgaggcagtttaagaaagcggtgacg
gacgccatcatgtcccgccgggccatccgcaacatgaacacgctctaccccgacgccacg
ccggaagagctgcaggccatggacaacgtctgcatcatctgccgcgaggagatggtgacg
ggcgccaagcgtttgccttgcaaccacatcttccacaccagctgcctgcggtcgtggttc
cagcgccagcagacgtgtcccacctgccgcatggacgttctccgcgcttccctcccggca
cagccgcctcccgagccgccggagcaagccccgccgccgccccagaccccccaagtccct
cagccccccaactttccccagggaatccttccccccttccctcccggaatgtttcccttc
tggccgccggttggtcccttcccaccggttcccggcgttcaaccgcccaacagcgccgaa
aacgccgcgccgagttccggtgccgcttcggccgccagacccggtgacgccgccaacgcc
ggatcggaagcggcggcggcagggacggtgccgggtcttcctttcccgccgccgtggatg
ggaatgccgtggccgcccctcttcggcttcccgccgatgccggtgccgccggctggcttt
gccggtttgacggaggaagaacttcgagccatggagggccacgatcggcaaaacctggaa
gcgcggttacagtgtctccagaacatccacaccctcctcgacgccgccatggtgcagatc
aaccaatacctgacggtcctggccaccatcgggtcgccccggcccgccgctccccggccc
ccctccgcccgtgagacccccgccgaggaacccgccccgctccgctcgcccggcagccct
tcggcacccgccgccgccgccgatcccgccgcgccggcgggcgccgaaggcttcaccgct
gaggaggaagaggaggacgaggacggcggcgaaggctcatcctcgctggacgaacccgac
acggcggagctccgccgccgccggctacagaaactggcgtcgccgccggcagcctcccac
tga
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