Platalea leucorodia (Eurasian spoonbill): 309603008
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Entry
309603008 CDS
T12103
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3 isoform 1
KO
K12600
superkiller protein 3
Organism
plec Platalea leucorodia (Eurasian spoonbill)
Pathway
plec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
309603008 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plec03019
]
309603008 (SKIC3)
Messenger RNA biogenesis [BR:
plec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
309603008 (SKIC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_16
TPR_12
TPR_11
TPR_17
TPR_8
TPR_CcmH_CycH
CFAP70_TPR_C
ANAPC3
CFAP70_mid_TPR
TPR_9
ARM_TT21_C
CABIN1_N
TTC22_N
TPR_15
Fis1_TPR_C
MSC6_N
TPR_Psidin_N
BTAD
TPR_30
TPR_20
TolB_N
HAT_PRP39_N
TPR_5
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
309603008
NCBI-ProteinID:
XP_082193396
LinkDB
All DBs
Position
Z:complement(86882050..86932836)
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKSNQTDVKGDLADVYQKLLELYESGDKQKWCDVCN
KLVELYHQEKKYLEVAETWQKLIQMKQEEGAEKAELHQLWKKMIQLLKDSTQNQDNKTEQ
LLLTAFEHAVNSADTVPGEDHQNLYKDFIQCLSKFPHETARLEKACNDMMALYPTVSYPL
EVLCLHFIQSGTLSEEALHCFPRLLEMDASSGPGIIGFGIKCLQEKKYKEAVQSLTEGLQ
KTRHCPAAWHYLAEAQMKIHKHRDAVLSCNQALEVLGTPEGPTLQWKNLILQLKAESLIK
IADTDAAEEAIKALEQIVDASSDPVVLALRGQAYLNKGLMDQASKISQELLLSHPDLAES
HALEGFIHYSQKNYEQAERSFLNAIERKAETAEYHQYLGLTYWFMGDETKKDKGKALTEF
LKAAKLDSYLGSVFCYLGNYYRDIAGDKSRARGCYKKAFELDGTDEESGTAAVGLSVELG
DMDTALSILNEVTEKASTGTAKWAWLHRGLYYLRTGQPSQAVADLQAALRADPKDSNCWE
SLGEAYLSRGSYSTALKSFRKASELNPELVYSIYRAAAVEQILGKYENAIATYQQILKKT
EDYVPALKGLGECYLMLARSALDNYFDRKAVDYIEQALEFFTRATKHRPDVSCLWKLLGD
TCTSVHVISPPKVNVQVLGSLLGKNAGKQILKKSELLRLGGRCYGRALKLMALPSIWCDL
GINYYRQAEHLTAVGTDMNEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEQINVVAWTNLGVLYLATGNIEQAHEAFKVAQSLEPSYLLCWIGQA
LIAEMVGSYDTMDLFRHTTELSMHTEGAKGYAHWVCSTLQDKSNRNTELYLYNIVQMNAI
PAAQVVLSKYTERNPDDPSAFTMLGYLNEYLHLKRQATDAYERAASLLKNSEDTEKYNTA
MQNYGRLLCALGQCDKAIKVYTSTPLTEFDGIVGIALAYFKKGLLQESIKAYEKALSVAE
SEQDKAHILTALAIIEYKQNKVDAAKTLLFKCSLKEPSTESLKALCTLGLVKQDATLATA
ALKELLKHEKGGDKIYERCLIASAVYALQGRNVGVQREISKAIHSNPDNPALWSLLSRLV
PLYASQKAKGGAVAGNVAHVLDVNHGKEVLLNIAVNQLAAGCHMLEDEKNNPLKNIQKAI
HLCPDNPATWAVLMAACHAENTIGYLNNTPPKRTDLEMTLVSTVSAKTGENNLPHNYVRN
LEDWCLCQAITSLEETGKLSEAEALCTKGLKSCPEHPALFLLLRQVQCKQLLQSHKELPD
TILEELRKTVMTSSTSVAAWQWLAKVYQSQRMMVGAEMCYRKSLQLASQQGSWNGKLSSL
LRLAMLALEICMANISNEHWPSLVQEATTEALKLSSCPLAALLQALLQYNRKMGARETRR
MLERVVYQPGNPETIVSVARWYLLQHLYAKDDYELIDVLIENAKANGDVRALELNEKLSA
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaggcagcattaaagagcgctagagatgcaatacgaaataaa
gaatataaggaagccttaaaacattgcaaggcagtcttgaagcaagaaaaaaataactac
aatgcttgggtttttattggcctggcagctgctgagttagagcagcctgatcaggccaaa
ggagcatataagaaggctattgaacttgaaccaaaccagttactggcatggcagggttta
gcaaatttatatgagaaatccaaccaaacagatgtcaaaggagacttggcagatgtttac
caaaagcttttggaactctatgaaagtggtgacaagcagaaatggtgtgatgtatgtaac
aagcttgtggaattgtatcatcaagaaaagaaatatttagaggtggctgaaacatggcag
aaactaatacaaatgaaacaggaggaaggtgcagaaaaggcagagctgcatcagctttgg
aagaagatgatccagttactgaaagacagtacacaaaaccaggataacaagactgagcag
ttgcttttaactgcatttgaacatgcggtgaactctgctgacactgttcctggtgaagac
caccaaaatctttacaaggactttattcagtgcttgtcaaaatttcctcatgaaacggca
aggttggaaaaggcctgtaatgatatgatggctttgtatcctactgtgagttatccttta
gaagtactttgcttgcactttattcagtcaggcactttgtcagaagaggccctgcactgt
tttcctagacttttggaaatggacgcaagcagtggtccaggcatcattggttttggtata
aaatgcctccaagaaaagaaatacaaggaggctgttcagagtcttactgaaggtttgcag
aagactagacattgtccagcagcgtggcattatttggcagaggcacagatgaaaattcac
aaacacagggatgctgtcctgtcctgcaatcaagctctcgaggttcttggaactcctgag
ggtcctactcttcagtggaagaaccttatccttcagttgaaagcagagtctttgattaaa
atagctgatactgatgctgcagaagaagccattaaagcactcgagcagattgtggatgca
agcagtgatcctgtggttttagctctcagaggtcaggcttatctaaacaaaggtttaatg
gatcaagcttccaagatttcgcaagagcttctgttgtcccaccctgatctggctgagtcc
catgctctagagggtttcatccattattcccaaaagaactacgaacaggcagaaagaagt
tttctaaatgctattgaaagaaaggcagaaactgcagagtatcatcagtacctggggctc
acatactggttcatgggtgatgagacaaaaaaagacaaaggaaaagcactcactgagttc
ttgaaggctgcaaaattggacagctacttgggaagtgtcttttgttatttaggtaactac
tacagagacattgctggagacaaaagtagagctcgtggttgctataaaaaggcttttgaa
ctggatggaactgatgaagaatctggaacagcagctgtaggcttaagcgtggaacttgga
gacatggacactgctctgtcaatcctgaatgaggtaactgaaaaagcgagtaccggtaca
gcaaaatgggcctggcttcatcgtgggctttactacctgagaactggtcagccgtcacaa
gcagtggctgatttgcaggcagctctcagggctgatccaaaggattccaactgctgggag
tctctaggggaggcttacttgagcaggggtagttattcaacagctctgaaatccttcagg
aaagcaagtgagctgaacccagagctcgtgtacagcatttacagagctgcagcagttgag
cagattctaggcaaatacgaaaatgctatagctacctatcaacaaatcttaaagaagaca
gaagactatgtgcctgcactaaaaggacttggtgagtgctatctcatgctggcaagatca
gcccttgataactattttgataggaaggctgtggattacatagaacaggctcttgaattt
tttacaagggcaacaaagcaccgtcctgatgtatcttgcctctggaaactgctcggagat
acctgtactagcgtgcatgttatttcaccacccaaagtgaatgttcaagttctaggatcc
cttctgggtaaaaatgcaggcaaacagatactgaagaaaagtgagctgctcagactggga
ggaaggtgttacggcagagctttaaaattgatggctttgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcagagcacctcacagcagtgggcactgacatgaatgag
atcagtgaactgctagagaagtctttacagtgtctcaaaaaagctgtgaggcttgacagc
aaaaatcatctttattggaatgcacttggtgtagttgcttcctgtagtgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaatcaatgttgtt
gcctggaccaacttgggggttttgtatctggcaactggaaacattgagcaagctcatgaa
gccttcaaggtagcccagtctctggagccttcttacttattgtgttggattgggcaggct
cttattgcagaaatggtaggcagctatgatactatggatctcttcaggcacaccactgaa
ctcagtatgcatactgagggagcaaaaggctacgcccactgggtatgttcaacactgcag
gataaaagcaacagaaacactgaactatatctatacaacattgttcaaatgaatgctatt
ccagcagcccaggtggtcctgagcaaatatacagaaagaaatccagacgatccgtctgct
ttcacaatgcttggttatttgaatgagtatctgcatctaaaaaggcaggcaacagatgcc
tatgagagggcagcttcgttgctgaaaaactctgaagatactgagaaatataatacagca
atgcaaaactatggcaggttactgtgtgcccttggtcagtgtgataaggccattaaggtt
tacacatcaacacccctaactgagtttgatggcattgtggggatagcattagcctacttc
aagaaaggactcttacaagaaagtatcaaagcctatgaaaaagccttgtctgttgctgag
tctgaacaagataaagcccatatcctgactgccttggcaataatagagtataaacagaac
aaagtggatgctgcaaagacactgctgtttaaatgttcgttaaaggaacctagtacggaa
agtctgaaggctttgtgcacactaggactggtaaagcaggatgctacacttgcaacagca
gccctaaaagaattactgaagcatgaaaaagggggcgataagatttatgagaggtgcctt
attgcatctgctgtttatgcattgcaaggtagaaatgtgggggtccagagagaaatctcc
aaagcaatacatagtaaccctgataatcctgccctctggtctcttctatctcgactagtt
ccactgtatgcatcacaaaaggcaaaagggggagctgtggcaggaaacgttgcacatgta
cttgatgtaaaccatggaaaggaagtcctgctgaatattgcagttaatcagttggcagca
ggatgtcacatgttagaagatgagaaaaacaatcctctgaaaaatattcagaaggcaatc
cacctctgtccagataatcctgctacctgggcagtgctaatggcagcctgtcatgctgaa
aacacgattggctatctaaacaacactccgccgaagagaacagatctagagatgacactt
gtatctacagtttcagccaaaactggagaaaataaccttcctcataattatgtccggaat
cttgaagactggtgtctatgtcaagctattaccagtctagaggagactggtaaactctca
gaagctgaagctctttgtaccaagggtttaaaaagttgccctgagcacccagctctgttt
ttgcttttgagacaagttcagtgtaagcagctgttgcagtctcacaaagaacttccagac
accatcctggaggagcttcgcaagacagtcatgaccagttcaacctcagttgcagcctgg
caatggctggcaaaagtatatcagtctcaaagaatgatggttggagcagagatgtgttac
agaaagagtctgcagttggcgtcacagcagggcagctggaatgggaagttatccagtctg
ctcaggctagctatgctcgcactggaaatctgcatggctaatatctcaaatgagcactgg
ccatccttggttcaggaggcaacaactgaagctttgaaactttcttcttgccccctggca
gctctcctacaagcactgctacagtataatcgcaaaatgggagcaagggagactcgtcga
atgttggaaagagtggtgtaccaaccagggaatccagaaaccatagtgtcagtggcacgc
tggtacctcctgcaacatctgtatgccaaagatgattatgaattaatagatgtgcttata
gaaaatgccaaagctaatggagatgttagagctctggaactaaatgagaagttgtcagca
agtgcctag
DBGET
integrated database retrieval system
