Pleionea litopenaei: Q9312_01740
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Entry
Q9312_01740 CDS
T09336
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
plei
Pleionea litopenaei
Pathway
plei02020
Two-component system
plei02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
plei00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q9312_01740
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Q9312_01740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plei03000
]
Q9312_01740
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
plei02035
]
Q9312_01740
Transcription factors [BR:
plei03000
]
Prokaryotic type
Helix-turn-helix
Other families
Q9312_01740
Bacterial motility proteins [BR:
plei02035
]
Flagellar system
Flagellar assembly proteins
Others
Q9312_01740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
Mg_chelatase
bpMoxR
AAA_7
AAA_16
AAA
Motif
Other DBs
NCBI-ProteinID:
WMS87659
UniProt:
A0AA51RUE2
LinkDB
All DBs
Position
408087..409553
Genome browser
AA seq
488 aa
AA seq
DB search
MFAELKVLLIDDDQNRAHDIQVILDFIGEQTEIATSENWSSKLKASDEYLAVAIGQTDQY
NSFESILAEIQKVSKRIPVLMIGDAAFSGQIPDDLAFQVVGRIDTPPKYNELLEVLHACQ
ECRGNQHVLEQGPKPLELFRSMIGASETVQSVRTLIAQVANSDANVLILGESGTGKEVAA
RNIHFLSDRTEKPFVPVNCGAIPGDLLESELFGHEKGAFTGALSSRQGRFELAQGGTLFL
DEIGDMPLAMQVKILRVLQEKSFERVGGNKTIQANVRIVAATHRNLEEEVAKGNFREDLY
YRLNVFPIEMPALRERAEDIPLLINELTTRLEKHGRDAVRFSGNALSSLMRHDWPGNVRE
LANLVERMCILFPYGVVDVNELPEKYQYLDGLTPYQSPELAKQIQQEEQTTPKIEEVAQK
ETIAKLPEEGLNLKEFMAKLEVDYIRKSLEQNDWVVAQAAQQLGMRRTTLVEKMKKYDIQ
RVNAEDPS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgctgaacttaaagtgttgctaattgatgatgatcaaaatcgtgctcacgatata
caggtgattctggactttattggtgagcaaactgaaattgcaacatccgaaaactggtct
tcaaaactgaaagcatccgatgaatacttagccgtagcgattggacaaactgaccaatac
aatagttttgaatccattcttgccgagatccaaaaagtatctaaacgcataccggtatta
atgatcggcgatgcggctttttcaggacaaattcccgatgatttagcatttcaagtggtc
ggtcgcatagatacacctccgaaatacaatgagttacttgaagttttacacgcttgccaa
gaatgccgaggcaatcaacacgtattagagcaggggcctaagccattagaattgtttcgc
agtatgatcggtgcgagcgaaacagtgcaatcggtacgaaccttgattgcacaggttgcc
aatagtgatgccaatgttttgatccttggtgagtcggggactggtaaagaggtggcggcg
cgaaacattcactttttatccgaccgaacggaaaaaccctttgttccggttaattgcggt
gccattcctggcgatttactggagtctgaattgtttggccatgagaaaggcgcttttact
ggcgcattgtcttcgcggcaggggcgattcgagctcgctcaaggtggtactttatttctc
gatgaaattggagacatgcctttagccatgcaagttaaaattcttcgagtgttgcaagag
aaaagttttgagcgcgtgggtggaaataaaaccatacaagcaaacgtacgaatcgttgct
gcgacacatcgtaatctcgaagaagaggtggcgaaagggaattttcgtgaagatttgtac
tatcgtttaaatgtttttcccatcgaaatgcccgctttacgtgaacgagcagaagatatc
cccttattgatcaatgagttaaccactcgtctcgagaaacatggccgcgatgcggttcgc
tttagtggcaatgccttgtcttccttaatgcgacatgattggcccggcaatgttcgagag
ttagccaacctagtggaacgcatgtgcatattgtttccgtacggcgtcgttgatgttaat
gaactgccggagaagtatcagtacttagatggattaacaccttaccagtcgcccgaattg
gccaagcagatccaacaagaagagcaaacgacgccaaagatagaggaggtggctcaaaag
gagaccatcgcaaaactgcccgaagaaggtttaaatctaaaagagtttatggccaagctc
gaagtcgactacattcgaaagtcgttagagcaaaacgattgggtggtggcgcaagcggca
cagcaacttggaatgcgccgtacaaccttagttgaaaaaatgaaaaagtacgacatacaa
cgcgttaatgccgaagatccttcatag
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