Pleionea litopenaei: Q9312_01750
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Entry
Q9312_01750 CDS
T09336
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
plei
Pleionea litopenaei
Pathway
plei02020
Two-component system
plei02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
plei00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q9312_01750
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Q9312_01750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
plei02022
]
Q9312_01750
02035 Bacterial motility proteins [BR:
plei02035
]
Q9312_01750
Two-component system [BR:
plei02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
Q9312_01750
Bacterial motility proteins [BR:
plei02035
]
Flagellar system
Flagellar assembly proteins
Others
Q9312_01750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA
Mg_chelatase
HTH_30
AAA_19
nSTAND3
AAA_3
MerR
AAA_7
AAA_16
HTH_11
HTH_24
AAA_30
bpMoxR
HTH_20
CPT
HTH_5
AAA_18
HTH_23
Fe_dep_repress
DUF2089
RsgA_GTPase
HTH_10
Asn_synthase
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WMS87661
UniProt:
A0AA51RU42
LinkDB
All DBs
Position
411214..412551
Genome browser
AA seq
445 aa
AA seq
DB search
MSSTHVLVLEDDAMLREALVDSLAMSGYRTTQAKDIDEAMVKWSEVTPDIVVSDVNLGER
NGKEFLSFVRQKDIATPFIFMTAYGTIEMAVEAMQNGANEFIQKPFKPQALMEIVERYRH
QDANDQAIVSDEKSIQLYRLAERIAATDSTVLLNGPSGAGKEVMARYIHNHSNRKDKPFI
ALNCAAIPENMLEATLFGYEKGAFTGAHQACPGKFEQAQGGTILLDEISEMDLALQAKLL
RVLQEREVERLGGRKTIQLDVRVIATTNRDLKVEVSEKRFREDLYFRLNVFPLTCLGLAQ
RPNDILPLAQHMLKKYAAQNKMPVPSISVAAQSALMSYAWPGNVRELDNVIQRALILCNG
HKIESEHLMFESISSNLEIKDDVDSGEDISTLGAGVRQHEFQIIVEALKQFNGKKKKVAE
ELGISPRTLRYKLAKMRELGYEMPA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtacccatgttttagtcttagaagatgacgccatgcttcgtgaagcacttgtt
gactctttggctatgtcgggctatcgaacaacccaagcaaaagacattgatgaggccatg
gttaaatggtcagaagtcacacctgatattgtagtcagtgacgttaatcttggtgagcga
aacggaaaagaatttctttcatttgtgcgtcaaaaagacatcgcaacaccgtttatattt
atgacggcttacggcaccatagaaatggcggtggaagctatgcaaaatggtgcgaacgaa
ttcattcaaaaaccatttaagccacaagcgctgatggaaattgttgaacgttaccgtcat
caagatgcgaatgatcaggcgattgttagtgacgaaaaaagcattcagctttatcgctta
gccgaacgaattgccgcaaccgactcgacggtattgcttaatggacctagcggagctggt
aaagaagtcatggctcgatatattcataatcattcaaatcgcaaagataagcctttcatt
gctttaaattgtgctgcgattccagaaaatatgctagaggctacgttatttggctatgaa
aaaggagcgtttacgggtgctcaccaagcatgtcctggaaagttcgaacaagcacaaggc
ggcacgattcttcttgatgaaatttcagaaatggacctcgctttacaagctaagctattg
cgcgttttacaagaacgcgaagtagagcgactgggtggacgaaaaacaattcaattagat
gttcgtgtcattgcgacaactaaccgcgatttaaaagtggaggtttctgaaaagcgtttt
cgcgaagatttgtattttcgcttgaatgtttttcctttaacttgccttggtttagcgcaa
cgacctaatgatattttaccgcttgcacagcacatgcttaaaaagtatgccgcacaaaat
aaaatgccagtacccagtatttcagttgccgcgcaatcggctcttatgagttacgcttgg
cctggaaatgttcgtgaacttgataatgtaattcaacgagcattgattttatgcaacgga
cataaaattgagtctgaacacttaatgtttgagtcgattagcagcaatttagaaattaaa
gatgacgttgattccggagaagatatttcaacgctcggcgctggtgtaagacaacatgag
tttcagattattgtagaagcgctaaaacagtttaacggtaaaaagaaaaaagttgcagaa
gaactgggtatcagcccccgaaccttgcgctataagttagcaaaaatgcgcgagttaggt
tatgaaatgccagcttag
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