Pleionea litopenaei: Q9312_01905
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Entry
Q9312_01905 CDS
T09336
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
plei
Pleionea litopenaei
Pathway
plei02020
Two-component system
plei02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
plei00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q9312_01905
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Q9312_01905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plei03021
]
Q9312_01905
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
plei02035
]
Q9312_01905
Transcription machinery [BR:
plei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q9312_01905
Bacterial motility proteins [BR:
plei02035
]
Flagellar system
Flagellar assembly proteins
Stator
Q9312_01905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_30
UPF0122
Motif
Other DBs
NCBI-ProteinID:
WMS87688
UniProt:
A0AA51RUF3
LinkDB
All DBs
Position
441882..442610
Genome browser
AA seq
242 aa
AA seq
DB search
MSRIDAYKKAGAQQQDVITQYAPLVKRIAHHLMSRLPSSVQVEDLMQAGMIGLLEASRNF
DATKGASFETFAGIRIRGAMIDEIRRGDWVPRSVHRNTRRIAEKIAEIEQKTGRDARDTE
VAEALGVAVEDYRVMLMETSNGHMLDFDDLGLSEDHFSEGLSHSDATENPFDDLQSADFK
SCLATAIGGLPERERLVLALYYDEELNLKEIGEVMGVSESRISQINSQAMIRLQSRLRDW
RK
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcgaattgatgcttacaaaaaggctggtgcgcaacaacaagacgtaattactcaa
tacgcaccgctggttaagaggatcgcacatcatttgatgtcgcgactgccttctagtgtg
caagtagaagaccttatgcaagcggggatgattggccttttagaagcttccagaaacttt
gatgcaaccaaaggcgcaagttttgaaaccttcgcaggtattcgaattcgcggagctatg
atcgatgagattcgtcgtggtgactgggtaccacggtcagttcatcgcaatactcggcga
atagccgagaaaatcgccgaaatagaacaaaaaacagggcgagatgctcgcgatacagag
gttgccgaagccttaggtgtggcggttgaagactaccgagttatgctaatggagacgtcc
aatggccatatgctcgactttgatgaccttggattgtctgaagatcattttagtgaagga
ttgagccattcagacgccaccgaaaacccattcgacgatttgcaatctgcagactttaaa
tcttgcttggcgaccgctatcggcggtcttccagagcgagagcgcttagttttagctttg
tactacgatgaagagcttaatcttaaagaaattggagaggtgatgggggtaagtgagtcc
cgaattagccaaatcaacagtcaagctatgattaggttacaaagtcgtttaagagattgg
cgtaaatag
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