Pleionea litopenaei: Q9312_02325
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Entry
Q9312_02325 CDS
T09336
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
plei
Pleionea litopenaei
Brite
KEGG Orthology (KO) [BR:
plei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plei03016
]
Q9312_02325 (rnd)
Enzymes [BR:
plei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Q9312_02325 (rnd)
Transfer RNA biogenesis [BR:
plei03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Q9312_02325 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DUF3575
RNAseD_HRDC_C
DNA_polI_exo1
DUF4214
Motif
Other DBs
NCBI-ProteinID:
WMS87772
UniProt:
A0AA51X6Y5
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All DBs
Position
525476..526606
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AA seq
376 aa
AA seq
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MSRFHWINDTTQLTPLVEHWRKLGCVFVDTEFHRERTFYPLLALIQLSDGTQNYLIEPKI
AKQCDAFVELLSDSNIRKVFHSASEDCEVLYRFFGVPMQGLFDTQIAGSFIGLGVSIGYA
AMVESLCDVSLAKGWSRSDWMQRPLTEQQLNYAVDDVEYLASAYVKLIDRLKEKPELASW
IEQDCAALESRVDALDNMDEAYLDVKNAWKLNKAQLIRLYHLSLWREHEARDRDLPKTFI
LKNDELFELSRLGLTDKQQLPFIDKWHPASRRRHGKALIDVLIDVEQSGDLPENFIAPLS
PKFWQAQTQSMQVARDGIESVATTLGLESEVLCSKKLLRQYVSHLLGKRPRLPRAWTKMR
EQNLGPVIRSAFEKSS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
ttgagccgatttcattggattaatgacacaactcagttaacgccattggtagaacattgg
cgaaagctcggttgtgtctttgtcgatacggagttccatcgagagcgtaccttttatcca
ttgttggcgctgattcaactgtccgatggaactcaaaattacctaatagaacctaagatc
gctaagcaatgcgacgcctttgttgagctgttgtcagacagtaacatccgtaaagttttt
cattctgcatctgaagattgtgaagttttatatcgattttttggtgttcctatgcaagga
ttattcgacactcagatagccggttcatttatcggactgggagtcagtataggttatgcc
gcgatggttgagtcgctttgtgacgtatccttagctaaaggttggtcgcgctcagattgg
atgcaaagaccacttaccgagcagcaactgaattatgccgtagatgatgttgagtacctt
gctagcgcttatgtgaaattgatcgatcgattaaaagaaaagcctgaattagcgtcgtgg
attgaacaagattgcgcggcattagagtctagagtcgatgctttagataacatggatgag
gcataccttgatgttaaaaatgcttggaaactgaacaaagctcagttaattcgcctctac
catctaagtctgtggcgagagcatgaagcgcgtgatcgagaccttccgaaaaccttcatt
ttaaaaaatgatgaactatttgagctgtcacgattaggcctgaccgataaacaacagtta
ccctttatcgataagtggcacccagcatcgcgacgtcgacatggcaaagcgttaattgac
gttttgatagatgttgagcagtctggtgacttgcctgagaactttatagcgcctctaagt
cctaagttttggcaagcccaaacacaatcgatgcaagtcgctcgagatggtatcgagtcc
gttgcaacgactttaggtttggagtcggaagtgctttgcagtaaaaagctacttcgtcag
tatgtatctcaccttcttggtaagcggcctcggctaccaagagcatggacaaaaatgcgc
gagcagaatctaggacctgtgataagatcagcgtttgaaaaatcgtcttag
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