Pleionea litopenaei: Q9312_05050
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Entry
Q9312_05050 CDS
T09336
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
plei
Pleionea litopenaei
Pathway
plei00040
Pentose and glucuronate interconversions
plei01100
Metabolic pathways
plei02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plei00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Q9312_05050
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9312_05050
Enzymes [BR:
plei01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Q9312_05050
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
WMS89207
UniProt:
A0AA51RX37
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Position
complement(1138089..1139549)
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AA seq
486 aa
AA seq
DB search
MIIDGRITPENTGQKQIDIKRVKNLTIQGQLGGAEFSGIGIKITDSQNIILRNLIIHHVD
IGAKDALGIEGDSHHIWVDHNEFFASLAVHEDYYDRLFDTKRGARNITVSYNYFHDSWKA
SLHGSSDSDWGERKITFHHNRFENINSRAPLFRFGIGHVFNNYYLNVQDSGINSRMDAKL
RVEQNVFEQSHNPIVSFYSDRVGYWDLRNNLLDGVSWKASSDGEIAGEAMKSTTSVELPY
RYYMDPSHCVREMVLAAAGAGKGLVRSDGQCNLVPDGSTNPPEPPTPPNPEPPNDGDNLA
LNAGSDGSSEQSGSSYSNVRDGDLNSFWMPRSATQESISIKRMQPFNKIIIRERNFATRS
WRLIDESNQVTLAAGEQLGPETVIQGLPLLSIDKVTLAIDHASKLVQIAEFELYHSTASD
TMKWLPKEAMLCSSEHQFCAFEGVKTVYYGAADRYYIQIHRDGVHCNNQVFGDPLFGTIK
SCFVLP
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
attattatcgatggtcgtataacgccagaaaataccggacaaaaacaaattgatataaaa
cgtgttaaaaacctcaccattcaagggcaattagggggcgctgagttttctgggattgga
ataaagatcaccgattctcaaaatattattcttcgtaatcttattattcatcatgttgat
attggtgccaaagatgcgctaggaattgaaggcgacagccatcatatctgggttgaccat
aatgagttttttgcaagtttagccgttcatgaagattactatgatagactgtttgatact
aagcgaggagctagaaacattacagtatcttacaattattttcatgatagctggaaagcc
agcttgcatggctcgagtgacagtgattggggtgagcgaaaaattacctttcatcacaat
cgattcgaaaatataaattctcgagcacctttatttcgttttggcatcggtcatgtcttt
aataattattacttgaacgttcaagactcaggtatcaatagtcgcatggatgctaagtta
agagtcgaacagaatgtgtttgaacaaagtcataatcctatcgtctccttttatagcgat
cgagtagggtattgggatttacgaaataacctactcgacggagtttcttggaaggcttca
agtgatggcgagatcgctggtgaggcaatgaaatcaacgacctccgttgaattaccttat
cgttattatatggatccaagtcactgtgtaagagaaatggtgttggcggcagcgggagcc
ggaaaaggccttgtgcgctcagatggtcaatgtaacctagtaccggacggttctaccaac
cctccagagccaccaacaccaccgaatcctgaaccaccaaacgatggagataacttagcg
ctcaacgcgggttctgatggcagtagcgaacagtcaggcagtagttattcgaacgttcgt
gatggagatttgaattccttttggatgccaagaagtgcaactcaagagagcatttcaatt
aaacgcatgcaacccttcaataaaattattattcgtgaaagaaacttcgcaacgcgaagt
tggcgcttgatcgatgagtcgaaccaagtaacgctagcagcgggcgaacaattaggacct
gaaacggtgattcaaggtttgccattgctatccattgacaaagtgactttagcgatcgat
cacgcatcaaagctagtgcaaatcgctgaatttgagctttaccattctactgcgtctgac
acgatgaagtggcttccgaaagaggctatgctttgctcaagcgaacatcagttctgcgcg
tttgaaggtgttaaaacagtctattatggtgctgcggaccgctattatattcaaattcat
cgtgatggtgttcattgtaacaatcaagtatttggtgacccattattcggaaccattaaa
tcttgtttcgttttgccttga
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