Pleionea litopenaei: Q9312_05965
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Entry
Q9312_05965 CDS
T09336
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
plei
Pleionea litopenaei
Brite
KEGG Orthology (KO) [BR:
plei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plei03032
]
Q9312_05965 (topA)
03400 DNA repair and recombination proteins [BR:
plei03400
]
Q9312_05965 (topA)
Enzymes [BR:
plei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Q9312_05965 (topA)
DNA replication proteins [BR:
plei03032
]
Prokaryotic type
DNA Topoisomerases
Q9312_05965 (topA)
DNA repair and recombination proteins [BR:
plei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Q9312_05965 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
WMS88457
UniProt:
A0AA51RVN8
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Position
complement(1340956..1343616)
Genome browser
AA seq
886 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGQDFIVKSSVGHVRDLPTGGGSKTPVDAKERARQAAITR
KMAPEEKARHKAEKAKQQLFKRMGINPEADWEAHYETLPGKEKVIKELKAQAAKADHIYL
ATDLDREGEAIAWHLKEIIGGEDDKFQRVVFNEITKKAIQAAFSKPSHVDMNYVNAQQAR
RFLDRVVGFMVSPLLWKKVSRGLSAGRVQSVAVKLIVEREREIRAFIPEEYWELFADVKG
SGHELRMQVSSKQGKKYRPTAEDQVNSDMAAIKGSHMEIISREDKPSRSKPGAPYITSTL
QQAASTRLKYSVKKTMMMAQRLYEAGYITYMRTDSTFLSDDALAACRSHIQSTYGDKYLT
PDVVKYANKEGAQEAHEAIRPSNVEVMAKDLMGMEPDAVKLYEMIWRQFVACQMPNAEYD
VTTLTAQAGDYELKAKGRVMRFDGWTKVQPPMKKNDDDVTLPDLKKGSALDLKELLPKQH
FTKPTPRYSEAALVKELEKRGIGRPSTYASIISTIQDRGYVSLRSRRFYAEKMGEIVTDR
LNENFNDLLDYSFTANMEHELDDVASGEKNWKQLLNEFYKDFSHKLEQAEKPVEEGGMKN
NQAVETDLVCPKCNKNKLAIRMATTGVFLGCTGFSLPKEEQCKNTVNLIPGEETEAVDKD
DEAESRNLRLKRRCSKCQTAMDSFLIDENRRLHVCGNSPNCDGYEIEEGTFKIKGYDGPV
IECDKCGSDMELKTGRFGKYFGCTNEECKNTRKLLRNGEPAPPKADPIPMPHLQCQKVED
TYVLRDGASGIFLAASQFPKNRETRPPLVEELLSVKDQLDPKFDYLTKAPVKDSEGNKTV
IRYSRKNKEQYVMSEKEGKATGWTAHYENGKWVVSEKKTKAKAKSK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatcactggtaatcgttgagtcacccgcaaaagcaaaaacgatcaataaatat
ttaggacaagacttcatcgttaagtcgagtgtcgggcacgtgcgagatctaccaacggga
ggtggctcgaaaacgcctgttgacgccaaagagcgagctcgtcaggccgctattactcgt
aaaatggcgccagaagaaaaagctcgccacaaagcggaaaaagcgaagcagcagcttttc
aaacgaatgggcatcaaccctgaagctgattgggaagcacattatgagactttacctggc
aaagaaaaggtcattaaggaactgaaagctcaggccgcgaaagcagaccacatctatctc
gcgacggatttggatagagaaggggaagccattgcctggcatttaaaagaaattattggt
ggcgaagacgacaagttccaacgcgtggttttcaatgaaattaccaagaaagccattcaa
gcggcattctctaagccttcacacgtcgatatgaattatgtgaacgctcaacaagcccgt
cgttttcttgatcgcgttgtgggctttatggtttctcctttgctctggaaaaaagtctct
cgtggactctccgccggacgtgttcaatcggttgccgttaaacttatcgttgagcgagag
cgagaaattcgcgcttttattcctgaagaatattgggaactgtttgccgatgtgaaagga
tcgggtcacgaattgcgaatgcaggtgagcagcaagcaaggtaagaaataccggccgacg
gctgaagatcaggttaatagcgatatggcggccatcaaaggcagtcatatggaaattatt
tccagagaagacaaaccatcacgcagtaaacctggtgcgccttacattacatcaactttg
caacaagcggccagtactcgattaaagtactcggtgaaaaagaccatgatgatggcacag
cgcctgtatgaggcggggtacatcacctatatgcgtaccgactcgacctttttaagtgat
gatgctttagcagcatgtcgttcacatattcaaagcacttatggcgacaagtacctgacg
cctgatgttgtgaagtacgcgaacaaagaaggggcgcaagaggctcatgaagccattcgt
ccttcgaatgttgaggtaatggcgaaagacttaatgggaatggagcccgatgccgttaaa
ctctacgaaatgatttggcgtcagtttgtggcttgtcagatgcctaacgcagaatacgat
gtaactacgttaaccgcgcaagctggtgattacgagttaaaagccaaagggcgagtcatg
cgattcgatggttggacgaaagtgcagcccccgatgaagaaaaatgacgacgacgttacc
ttaccagacctcaaaaaaggctctgcattagacttaaaagagttactaccgaaacagcat
ttcacgaaaccaacgccccgttacagcgaggccgctttggtaaaagaattagaaaagcgt
ggcataggtcgaccttcaacctatgcatcgattatctcaaccatacaagatcgaggctac
gtgagtctgagaagccgacgcttctacgctgagaagatgggcgagatagtaactgaccga
ttaaatgaaaactttaatgatctgctcgattattctttcaccgcaaacatggaacatgag
ctagatgatgtggcaagcggcgagaaaaattggaagcagttattaaacgagttttacaaa
gattttagtcataaactagagcaagccgagaaaccggtcgaagaaggtggcatgaaaaat
aatcaggccgtcgaaacggatctggtttgtccgaagtgcaataaaaataaactcgcgatt
cgcatggcaaccacgggcgtgtttcttggttgtacaggcttctcgttaccgaaagaagag
cagtgcaaaaataccgtcaatttaattcctggcgaagaaaccgaagcggttgataaagac
gatgaagcggaatcaagaaatttacgattgaagcgtcgttgctctaagtgccaaacggca
atggattccttcttaatcgatgaaaaccgtcgtttgcatgtgtgtggaaactcgcccaac
tgcgatggatatgaaatcgaagaaggtacattcaagattaaaggctacgatggcccggtt
attgagtgtgataagtgtggctctgatatggagcttaaaaccggacgttttggtaaatac
tttggatgtactaatgaagagtgtaaaaacactcgtaaattactgcgcaacggtgagcca
gcgcctccgaaagccgatcctattccaatgccgcacttgcagtgtcaaaaagtcgaagac
acttatgtgctacgtgatggagcatcagggatcttcttagcggccagtcagttcccgaaa
aatagagaaactcggccacctttggttgaagaattactctcggtgaaggatcaactggat
cctaagtttgactacttgaccaaagcgccggtgaaagatagcgaaggaaataaaaccgtc
attcgttatagccgtaaaaataaagagcaatacgtaatgagtgaaaaggaaggcaaagcg
actggctggactgctcactatgaaaacggcaaatgggttgtttcagaaaagaaaaccaag
gcgaaagcgaaatccaaatag
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