Pleionea litopenaei: Q9312_06360
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Entry
Q9312_06360 CDS
T09336
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
plei
Pleionea litopenaei
Brite
KEGG Orthology (KO) [BR:
plei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plei03016
]
Q9312_06360
Enzymes [BR:
plei01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Q9312_06360
Transfer RNA biogenesis [BR:
plei03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Q9312_06360
Prokaryotic type
Q9312_06360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WMS88536
UniProt:
A0AA51RVI3
LinkDB
All DBs
Position
complement(1433272..1434327)
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AA seq
351 aa
AA seq
DB search
MQSNSEISFPWKPSQSPVIAAAKYKSSPEDFIVEEELSFELSGDGEHEFLWVEKRNANTQ
WVIKHIAQWLGVRERDIGHAGLKDKHGVTRQWLSVYLPGKALPETLLTHDDFAILKTVRH
NKKLKIGSIRENRFTLILRAVKGEKEDIEQRLQKIAQTGFPNYFGEQRFGFAMNNLSKAR
AMLVQKRRFKKSQQSIYLSAIRSWFFNQFLASRISSEHWQRPMTGDRINLNSTRSFFVYD
AEDEDLSGRLLAGDVHVAGPLPGKDIFSLQPPLSDDLLKTWEEYADCLEFLPGKTDFRSL
RVIPGNLSWQWMNSDDDLELSFALSSGSYATALLHELGSVEDAAPKHRNAG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctaattctgaaatatcttttccatggaaacctagtcaaagtccggtgattgcg
gcagcaaaatataaaagttcgccagaagattttattgttgaagaagagctttcgtttgaa
ctgtcaggtgacggtgagcatgaatttttatgggtagagaagcgaaatgctaatacgcag
tgggtaatcaaacatattgctcaatggctgggtgtgagagagcgagatatcgggcacgct
ggtttaaaagataaacacggtgttacacgtcagtggttaagtgtttatctaccgggcaaa
gcattacctgaaacgctgttaactcatgacgacttcgccattctaaaaaccgttcgacat
aataaaaagttaaagattggcagcattcgagaaaatcgttttacactaatactgcgagcg
gtcaaaggcgaaaaagaagacattgagcaacggctacagaagattgctcaaacagggttc
cccaattactttggggagcaacgcttcggattcgcaatgaataacttatcaaaagcacgg
gcaatgttggtacaaaaaagacgctttaaaaagtctcaacaatcgatctatttgtcagct
attcgttcttggttctttaatcaatttttagcgtctcgaatctcatctgaacactggcag
cgtccaatgaccggagatcgtatcaacttaaactcaactcgatcgttttttgtttatgac
gctgaagacgaagacttgagtggtcgattattagcgggtgatgtccatgtggcaggcccg
ctgcctggaaaagatatcttttctttgcaacctccgctgtctgatgacttacttaaaacc
tgggaagagtatgccgattgccttgaatttcttccgggaaaaacagactttcgttcgttg
cgggtcattccaggaaacttgagttggcaatggatgaattctgatgacgatttagagttg
agttttgcactgtcaagcggcagttatgcaacggcgttactgcatgagttgggcagtgtt
gaagatgcggccccgaagcatcgcaatgccggctaa
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