Pleionea litopenaei: Q9312_08680
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Entry
Q9312_08680 CDS
T09336
Name
(GenBank) helicase C-terminal domain-containing protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
plei
Pleionea litopenaei
Pathway
plei03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plei00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Q9312_08680
09124 Replication and repair
03420 Nucleotide excision repair
Q9312_08680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plei03021
]
Q9312_08680
03036 Chromosome and associated proteins [BR:
plei03036
]
Q9312_08680
03400 DNA repair and recombination proteins [BR:
plei03400
]
Q9312_08680
Enzymes [BR:
plei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Q9312_08680
Transcription machinery [BR:
plei03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Q9312_08680
Chromosome and associated proteins [BR:
plei03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Q9312_08680
DNA repair and recombination proteins [BR:
plei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Q9312_08680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
Phe_ZIP
Motif
Other DBs
NCBI-ProteinID:
WMS88976
UniProt:
A0AA51X8H2
LinkDB
All DBs
Position
complement(1945611..1946993)
Genome browser
AA seq
460 aa
AA seq
DB search
MTFGYLISDIVTKKSVSVKLGKPHIQLAHFEQFGKSQVVLVDEGHNLIDRSRQMYSADII
ESDALNVLQETQHKTFFTKQINRLSSVLVAVEELAKSTSTEQSRGNAKDNSEWRGGVLDS
ALIEKLHATTQSIQANLFDFSLSESLSELEMSWLKQIIRFNVILSLRDDAHQFFISHQTN
GLIDTLNVHLICLNAANYLEQIYKNLRSLIVFSGTLRPDTYVAETLGFRDALPIKRVPSI
FSHNQLGVFISTRIDTRYRYRDGFIQAIVADIKAVIESKAGNYMVAFSSYHLLEKVAEEF
AKQFPKTVLSKQERASTLEQKEEFISQFFNQRSVLGFVILGGVYTEGVDYRGDSLDGVIV
VGSGMPQVNQLQAHLTQYFEGLGLSGFDMTYRYPALQRVFQTTGRVIRQLSDKGVVVLLD
KRFAEPRFLRMAPEYWSPKCYRATDQLQQALQEFWLKNEQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttgacatttggatacctcatttctgatattgtaactaagaaatctgtatccgttaaattg
ggtaagcctcatattcaactggctcactttgagcagtttggtaaaagccaagtggtgtta
gtcgatgaaggtcataatttaattgatcgatctcgacaaatgtattcggcagacattatt
gagtccgatgccctaaatgtacttcaagaaacacagcataaaactttctttacaaaacaa
attaaccgattaagtagtgtattagttgctgttgaagagctggccaagtcaacgtcaact
gaacagtcgagaggtaatgctaaggataactcagaatggagagggggtgttttggattct
gcgttgatagaaaaactccatgcaaccactcaaagtattcaagccaacctgtttgatttt
tctctctctgaaagcttgtctgagttagaaatgagttggttaaaacaaattattcgattt
aacgtgattttgtcattacgcgatgatgctcatcagttcttcatttctcatcaaacgaat
gggttaattgataccttaaatgtgcatctaatttgcttgaacgctgctaattatttagag
caaatctataagaatttacgcagtctaattgtcttttccggaaccttacgtcccgacacc
tatgtcgcagaaactttaggtttcagagacgcgttaccaattaagcgtgttccatccatt
ttttcacacaatcaactaggtgtttttatctccactcgtattgacactcgttatcgatat
agagatggttttatacaagccattgttgccgatataaaggcagtcattgaaagtaaagca
ggaaactatatggtcgctttctccagctatcacttacttgagaaagtggcagaagaattc
gcgaaacaatttcccaaaacggtattgagcaaacaggagcgggcgtcgacattagagcaa
aaagaggaatttatcagtcaattttttaatcaacgttcagtgctagggttcgtcatatta
ggcggcgtatatactgaaggcgttgattatcgaggagactctttagatggtgttattgtg
gtaggaagcggcatgccacaggtgaaccagttgcaagcgcatttaactcaatactttgag
gggctcgggttaagcggattcgatatgacgtatcggtatcctgccttacaaagagtcttt
cagacgacgggtcgcgtgattcggcagttatccgataaaggcgtggtcgtgctattagac
aagcgttttgcggaaccacgctttctgcgtatggctcctgagtattggtcccctaaatgc
tatcgagcgacggatcagttgcagcaagcgctgcaagagttttggttaaaaaacgaacag
taa
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