Pleionea litopenaei: Q9312_09680
Help
Entry
Q9312_09680 CDS
T09336
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
plei
Pleionea litopenaei
Brite
KEGG Orthology (KO) [BR:
plei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plei03016
]
Q9312_09680 (thpR)
Enzymes [BR:
plei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Q9312_09680 (thpR)
Transfer RNA biogenesis [BR:
plei03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Q9312_09680 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
WMS89161
UniProt:
A0AA51RWX6
LinkDB
All DBs
Position
2142556..2143131
Genome browser
AA seq
191 aa
AA seq
DB search
MKLANRGHHRLFFALDFEDDFKQQLHSWSINQPIDGRRVELNNLHLTLLFLGSIKNHQVY
DIIDNVELPEIPTFDISVQKTGYFPKQEILFCEISEGEQEVMHISRVLSNSMQQLKSHRE
KKRFVPHITLARDAKPPVDFPITPTLSTRIDRFCLMESIQVKSGMHYETVESWPLKTMSE
KEIILGRSLDG
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgccaatcgagggcatcaccggttatttttcgcactcgacttcgaggacgac
tttaaacaacaattgcatagctggagcattaatcagcccatcgatggccgtagagttgaa
cttaacaacttgcatttaacgttattatttttgggtagcatcaaaaaccatcaagtctat
gacatcattgacaacgtcgaacttcctgaaatacccacctttgacatcagtgtacaaaaa
actggttattttccaaagcaagaaatattattttgtgaaatttctgaaggagaacaagaa
gtaatgcatatttctagagttttgagcaactccatgcaacagctcaaaagccatcgagag
aagaagcgctttgttcctcatataacccttgctcgagatgcaaaacctccggttgacttt
cctatcacccctaccctgagcactcgcatcgaccgtttttgtttgatggagtcaattcaa
gttaaaagcggcatgcattacgaaacggtagagtcatggccactaaaaaccatgagcgaa
aaagagattattctaggacgctctctcgacggttaa
DBGET
integrated database retrieval system
