Pleionea litopenaei: Q9312_11080
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Entry
Q9312_11080 CDS
T09336
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
plei
Pleionea litopenaei
Pathway
plei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q9312_11080 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plei03019
]
Q9312_11080 (rppH)
Messenger RNA biogenesis [BR:
plei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Q9312_11080 (rppH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
WMS85758
UniProt:
A0AA51RQG2
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Position
complement(2460720..2461259)
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AA seq
179 aa
AA seq
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MIDSEGFRANVGIIVCNESGQLLWTRRAGQNSWQFPQGGVNEGETPDETMFRELYEEIGL
SRQDVKVLGSTKNWLRYRLPSRYIRHDSVPLCIGQKQKWYLLKLTSDDSRLDFATTNHPE
FDDFMWVGYWYPLRQVVAFKREVYRQALLELLPMVHEQQRLQRQKRGRRRHHHRRPQNG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
gtgattgattcagaaggatttcgtgccaacgttggcataatcgtctgtaatgaatctggt
cagttactttggacgcgtcgtgctggacaaaactcctggcagttcccccaaggcggggtt
aatgagggcgagacaccggacgaaaccatgtttcgtgaactctatgaggaaataggtctc
agtcgtcaggatgtaaaagtgttgggttcaaccaagaattggttgcgctatcgactaccc
agtcgttacatccgacacgacagtgttccattgtgcattggtcagaagcaaaaatggtat
ttgcttaaattaacatcagatgacagtcgactcgacttcgcgacaacaaaccaccctgag
tttgatgattttatgtgggtaggctattggtatccgttgcgccaagttgttgcttttaag
cgagaagtttatcgacaggcattgctcgagctgttgcctatggtgcacgaacaacaacga
ctgcaacggcagaagcgaggtcgtcgtcggcaccatcatcgcaggccacaaaatggataa
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