Pleionea litopenaei: Q9312_17300
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Entry
Q9312_17300 CDS
T09336
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
plei
Pleionea litopenaei
Pathway
plei03030
DNA replication
plei03430
Mismatch repair
plei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q9312_17300 (dnaE)
03430 Mismatch repair
Q9312_17300 (dnaE)
03440 Homologous recombination
Q9312_17300 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plei03032
]
Q9312_17300 (dnaE)
03400 DNA repair and recombination proteins [BR:
plei03400
]
Q9312_17300 (dnaE)
Enzymes [BR:
plei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q9312_17300 (dnaE)
DNA replication proteins [BR:
plei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q9312_17300 (dnaE)
DNA repair and recombination proteins [BR:
plei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q9312_17300 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
WMS86973
UniProt:
A0AA51RSQ2
LinkDB
All DBs
Position
3875301..3878777
Genome browser
AA seq
1158 aa
AA seq
DB search
MSSFVHLRVHTEYSMSNGLCRIKPLIKATAELQQPAIALTDQNNICGLVRFYSEAQANGI
KPIIGCDVWMESTELSNDLCRLVLLCMTDEGYTNLKRLVSEAYTTNQHRGKPVIKREWFE
RWNQGLIVLSGGREGDVGKALLAGNMDLAAQLLGFWNTFFHNRYYLELQRTGRENEEDYI
HAAVGLALGSGTPVVATNDVNFLTQDDFISHEARVCIGMGRVLEDPDRPRNYSDQQYLKS
AEEMIELFSDIPEAIENTLEIAKRCSVELKLGTYYLPKFPTGEMDEAEYLCKVSREGLEE
RLQVLLDPSADDFSEQRKPYDERLEIELNVINQMGFPGYFLIVADFIQWAKDNDVPVGPG
RGSGAGSLVAYALKITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYVAET
YGRDAVSQIITFGTMAAKAVVRDVARVLGKPYGLADRLSKLIPPTPGMTLAKALVESPEL
VDAIEQDEEAQEIWEMAKSLEGVVRQAGKHAGGVVISPTTLTDFTAIYCDEDYSGLVAQF
DKDDVEKAGLVKFDFLGLKTLTIVDWAMVIVNRLRAGEGKEPLDINHIPLDDKATFDLLK
ASDTTAVFQLESQGMKNLIDRLQPSNFEDIIALVALFRPGPLQSGMVDDFINRKHGRAEV
SYPHPDYQHESLQPILEPTYGVIVYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKPEEMA
KQRTFFADGAEKLGIDPDLAMNIFDLVEKFAGYGFNKSHSAAYALVAYQTAFLKAHYPAA
FMAAVMSADMDNTDKVVTFVDDCLHHDIKIMPPDVNQGEYKFTVTDENTIIYGIGAIKGV
GEGAIESFVNERKENGPFTDLFDFCRRVDLRKVNRRTIENLIKAGALDQLGPNRSVLMAS
LDEAIKAADQQNKAAAIGQDDLFGEAFIADATTGELNWAKVRPWPEDLVLQGEKETLGLY
LTGHPIERYLPELKSFVPNRINQLQPTRRGENVKASGLIIDVMVRTNKKGDRFAIVTIDD
KSGRITLFVGANIYEQYKEVIKNDNIIIAEGDVKFDDFSGGLRINTVSLLDFVSAREQYA
KSLTVELKDESVASSIADQLMRYIKPCLNGNTPLRFKYHFNGHTAHINLGDDWRIQPTDD
LIYQLEGIEGCEKVSLDY
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatttgtgcatttgcgcgtacatactgaatattccatgagcaatggtttgtgc
cggataaagccgttaataaaagccacggcagaactgcaacagccagcaattgctttgacc
gatcaaaataatatctgtgggttagttcggttttacagtgaggcccaagcgaacggcata
aagcctattattggttgtgatgtgtggatggagtcgaccgaacttagcaatgacctgtgt
cgcttggttctgttatgcatgacggatgaaggatacaccaatcttaaacggttggtctcc
gaagcttatacgacgaatcaacatcgtggtaaacctgtcatcaaacgagagtggtttgag
cgttggaaccaaggcctaatcgttttatcgggtggcagagaaggcgacgtaggtaaagcg
ttgctcgccggaaatatggatttggcagctcaacttcttgggttttggaatactttcttt
cataaccgctattacctcgagttgcagcggacgggtcgtgagaacgaagaagactatatt
catgcagcggtcggacttgcactcggatcagggacgccggtggttgctacgaacgatgtg
aacttcttaacacaagacgattttatttcacatgaagcacgtgtgtgtatcggaatggga
cgagttcttgaagaccccgaccgcccaagaaactattcagatcagcaatatctaaagtcg
gcagaagaaatgatagagctattctccgatattccagaagccatcgagaatacccttgag
attgccaagcgttgttctgttgaactcaaattgggtacctattatttgccgaagtttcca
accggtgaaatggatgaagcagaatatttgtgtaaagtgagtcgagagggtttagaagag
cgtctacaagtcttactggatccgagtgccgatgatttctctgaacaacgaaagccctat
gatgagcgtctcgaaattgaattgaacgtgatcaatcaaatgggttttcctggatacttc
ttaatcgttgctgactttattcagtgggcgaaagataatgatgtacccgttggacctggt
cgaggttcgggtgctggttcgctggttgcctatgcacttaaaatcaccgatttagatccg
ctcgcttacgatcttctttttgaacgattcctaaacccagagcgggtttctatgcctgac
tttgacgtcgacttttgcatggatgggcgcgatcgagtcattgactacgttgccgaaaca
tatggtcgcgacgcggtctcgcaaatcatcacctttggcacgatggcggctaaggcggtg
gtgagggacgtcgcgcgagttttgggtaaaccttatgggctggccgatcgcttgtctaaa
ttaattccaccgacaccgggtatgacccttgcgaaagcgttggtagaatcgcccgaactg
gttgacgcgattgagcaagacgaagaagcgcaagaaatctgggagatggcgaaatctctt
gaaggtgttgttcgacaagcaggtaagcatgctggaggcgtggttatttcgccaaccaca
ttaacggattttaccgccatatattgcgacgaggattacagtggtctcgttgcgcagttt
gataaagatgacgtagaaaaagcgggcttggtaaagtttgacttcttaggtctgaaaacc
ctaaccatcgttgactgggcgatggtgattgtcaatcgactgcgagcaggtgaaggtaaa
gagccgctcgatattaatcacattccgctcgatgacaaagcgacatttgatttactaaaa
gcatcagatacgacagcggtttttcagctggaatcgcaaggtatgaaaaacctgatcgat
cgccttcaacccagtaacttcgaagatatcatcgcgttggtggcactgtttcgtccaggg
cctttgcagtctggaatggttgatgactttattaatcgaaaacacggccgagctgaagtt
tcttacccacaccctgattatcaacacgaatcattgcagcctatcttagagccgacctat
ggcgttattgtttatcaagaacaagttatgcagattgcccaggtgttggccgggtatagt
ttaggtggcgctgatctattacgtcgagccatggggaaaaagaagccagaagaaatggca
aagcagcgaaccttttttgctgatggtgctgagaaacttggaatcgacccagacttggcg
atgaacatttttgatctggttgaaaaatttgcgggctatggattcaacaaatcacactcg
gccgcctatgcactagtggcctatcaaacagcttttctaaaagctcattatcctgcggcg
tttatggctgctgtcatgtctgccgatatggacaatacggacaaggtggttacctttgtt
gacgattgtttgcatcatgacattaaaattatgccgcccgatgtgaatcaaggtgaatat
aagtttaccgtgacggatgagaacaccattatttatggaattggtgcgatcaaaggggtg
ggtgaaggtgctatcgaaagttttgtaaatgaacgaaaagaaaatggaccctttactgac
ttgtttgatttctgtcgaagggttgatttgcgtaaagtgaatcgacgaacgatagaaaac
ttaatcaaggcgggggcgctggatcaactcggacctaatcgaagtgtgctgatggctagc
ttagacgaggcgatcaaagcagctgaccagcaaaataaagcggcggcaattggtcaagat
gatctattcggagaggcctttattgccgatgcgacaaccggggaacttaactgggcaaag
gttcggccatggcctgaagatctcgtgctgcaaggtgaaaaggaaacattggggctgtac
ttaaccggacatccgattgaaaggtatttgcccgagttaaaaagctttgtccccaatcga
ataaaccaattgcaacccactcgacgaggggaaaatgttaaagcctcgggactgatcatt
gatgtcatggtgaggaccaataagaaaggtgatcgcttcgcaattgtgaccatcgatgac
aagtcaggtcgaattactttatttgtcggtgctaatatttatgagcagtacaaagaggtg
attaaaaacgataacatcatcattgcagaaggtgatgtaaagttcgatgatttcagtggc
ggccttagaattaataccgtgtctttactcgactttgtttctgctcgagaacagtacgca
aaaagtttaacggttgaattaaaagatgagtcggtggcgtcgagcattgccgatcaatta
atgcggtatattaaaccgtgtttaaatggcaatacaccgttgcgttttaaataccatttc
aatggacatacagcgcatataaatttaggagacgactggcgtattcaaccgactgatgat
ctgatctatcaactcgaaggcatcgagggttgtgaaaaggtttcgttagactactga
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