Paenibacillus lentus: EIM92_04020
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Entry
EIM92_04020 CDS
T05914
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
plen
Paenibacillus lentus
Pathway
plen03030
DNA replication
plen03430
Mismatch repair
plen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EIM92_04020 (dnaX)
03430 Mismatch repair
EIM92_04020 (dnaX)
03440 Homologous recombination
EIM92_04020 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plen03032
]
EIM92_04020 (dnaX)
03400 DNA repair and recombination proteins [BR:
plen03400
]
EIM92_04020 (dnaX)
Enzymes [BR:
plen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EIM92_04020 (dnaX)
DNA replication proteins [BR:
plen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EIM92_04020 (dnaX)
DNA repair and recombination proteins [BR:
plen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EIM92_04020 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
DnaX_C
RuvB_N
TIP49
AAA_30
AAA_5
AAA_22
RCF1-5-like_lid
AAA_16
AAA_assoc_2
AAA_19
AAA_7
AAA_14
AAA_2
Rad17
End3
Mg_chelatase
nSTAND3
ABC_tran
RNA_helicase
AAA_18
AAA_28
PIF1
TsaE
Motif
Other DBs
NCBI-ProteinID:
AZK45465
UniProt:
A0A3S8RR49
LinkDB
All DBs
Position
complement(872174..873943)
Genome browser
AA seq
589 aa
AA seq
DB search
MEHIALYRAWRPQSFQDMVGQQHIIRTLQNAIREQRLSHAYLFSGPRGTGKTSAAKILAK
AVNCEEGPAPEPCNECDSCRRITAGAVMDVLEIDAASNRGVEEIRDLREKVKYAPTEVRQ
KVYIIDEVHMLTTEAFNALLKTLEEPPPHVMFILATTEPHRLPATVISRCQRFDFRRVSL
EEQSERLRLICEQEGITAEDEAIQYIARLSDGGMRDALSILDQIASFSDGHVSYKQALDM
TGGIPSKQFAEIAKTLVEGDIGGMLQLIEGLMQEGKSADKCMENLLYYFRDLLMIKMVPN
ADKMTERVLDSQEFKEMAELFTRSQLFRIIDTLNHYQIEMKYALQPQTLFEVALLKLCSI
PQSEDAVPSQSVSSAASAIADSSGGQSEVQQLRRQLAELEKKLERALQGGLTSGGQGAAQ
KGGRSSARTAAPRVASKVKIPAGIDRYVAQRSSPEFLAVQGKWNQVLQGVKDEKITIHAW
FVNGEPVSVLEDAVLVAFKNDIHRETTEKPANKQLIEMVMERVLGSPYRLVTMMLKDWSD
SIEGAAVDPSKEEPFQLEQVAEDGSSGSKEPWVDEALQMFGDDLVVVKE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggagcatattgcgctgtaccgtgcatggcggccgcagtcgtttcaggacatggtagga
caacagcacattattcgtacgttgcagaatgcgattcgggagcagcggctttcgcacgct
tatttatttagcggaccccgaggaacaggaaagacgagtgcggccaaaattttggccaaa
gcggtgaactgtgaggaggggccggccccagagccgtgcaacgaatgtgactcgtgccgt
cggattacggcaggagctgttatggatgtgcttgagattgacgccgcctccaaccgggga
gttgaagaaattcgtgatttgcgtgaaaaggtgaaatatgcccctactgaggtgcggcag
aaggtttatatcattgatgaagttcatatgctgacgacggaagcgtttaatgcattgctt
aagacgctggaagaaccgccgccgcacgtcatgtttatcttagcgacaacagagcctcat
cggcttccggccacggtcatatcccgctgccaacgttttgacttccgccgagtatctttg
gaggagcagagcgagaggttaaggcttatatgtgaacaagagggcataactgcggaggat
gaagcgatccagtatatagctcgattgtcggatggcggtatgcgagatgcgcttagcata
ctggatcaaattgcatctttctcagatggacatgtatcctacaagcaggcgcttgatatg
actggcgggattccttcgaaacagtttgcggaaatcgcgaagacgctggtcgaaggcgat
attggcggtatgctgcaattgattgagggtcttatgcaggaaggcaagagtgctgataaa
tgcatggagaacctgctctattatttccgtgatttattaatgattaaaatggtgccaaat
gcagataagatgacagaacgcgtgttggactcccaggaattcaaagaaatggcagaattg
ttcacgcgttcgcagctatttcggattatcgatactttgaaccattatcagattgaaatg
aaatatgcgctgcagccgcaaacattgtttgaggttgctcttctgaagctgtgcagtatt
cctcagagtgaagatgctgttccttcccagtctgtatcttcggccgcttcggctatcgct
gattcctctggtggtcaatcggaggttcagcagctgcgtcgtcaactggctgaattagag
aagaagcttgaacgtgcgctgcaaggaggtttgacgagtggggggcaaggtgctgcgcag
aaggggggtcgttcgagtgcgagaacggctgcgcctcgtgtagcctccaaggtcaagatt
cctgcgggaatagatcgatatgtggcgcagcgaagcagtccggaatttttggctgtacag
ggaaagtggaatcaggtgcttcaaggcgtgaaggacgagaagattaccattcatgcttgg
ttcgtcaatggcgagcccgtttctgtcctggaggacgccgtgctggtcgcattcaagaac
gatatccatcgtgaaactacggagaagccagcaaataagcagctcattgagatggttatg
gagcgggtattaggctcgccatatcggctggttacgatgatgctcaaggattggagcgac
agtattgagggcgcggcagttgacccgtccaaagaggagccctttcagttagagcaggtc
gcagaagacggtagcagcggcagtaaggagccgtgggtggacgaagcgctacaaatgttt
ggggacgatcttgttgtcgtgaaggagtaa
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