Paenibacillus lentus: EIM92_06125
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Entry
EIM92_06125 CDS
T05914
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
plen
Paenibacillus lentus
Pathway
plen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EIM92_06125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plen03019
]
EIM92_06125
03009 Ribosome biogenesis [BR:
plen03009
]
EIM92_06125
Enzymes [BR:
plen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EIM92_06125
Messenger RNA biogenesis [BR:
plen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EIM92_06125
Ribosome biogenesis [BR:
plen03009
]
Prokaryotic type
rRNA helicases
EIM92_06125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
AZK45832
UniProt:
A0A3S8RSB7
LinkDB
All DBs
Position
1355888..1357297
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AA seq
469 aa
AA seq
DB search
MTTFEQWGILPELIHTLQSHGISRPTPVQQEAVPVLLAGEDVIVQAQTGTGKTLAFLLPI
MDKLKADRPDAQALIITPTRELAIQITAEARKLAAAREGISILAAYGGQDVERQLRKLQN
GTQLVIGTPGRLLDHLRRGSLTLGAVRMLVLDEADQMLHMGFLAEVEAIIRMVPKSRQTM
LFSATMPDNVKRLARTYMDRPRDIRIAETSRITLDSIRQIVVECTDRGKQGALIEMIRSH
RPYLAVIFCRTKRRASKLNEALQEAGFASDELHGDLSQSKREQVMRAFRDAKLELLVATD
VAARGIDVEGVTHVFNYDIPQDVDSYIHRIGRTGRAGEKGIAITFASPRDIDALRNIERG
IGLKLERQRQDKSGAAVVVKEQTTGKRESRDGAGRGRRTEGRKTANGKTNGGRRGGAESA
SGWGRGASSSGRARGGRNAHARGGSAGSSPRGDGGGRRGGRERGGRRGR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacttttgagcaatggggcattttgcctgagctgattcataccttacagagtcat
ggcattagccgtccgacgccagtgcagcaggaagctgtacctgtgctgctggccggggag
gacgttatcgtgcaagcgcagacggggacggggaaaacgctggcttttctgctgccgatt
atggacaagttgaaggctgaccgtcctgatgcgcaagcgctaattattacgcctacacgg
gaattggctatccaaatcactgcagaggcgcgcaagctggcggctgcacgtgaagggata
tccattctggccgcttatggaggacaggacgtagaacggcagctccgcaaactgcaaaat
ggaacccaactggtcatcggtaccccgggccgtctgttggatcatttgcgccggggttcg
cttacgctgggagccgtacgcatgctggtgctggacgaggcagatcagatgctgcatatg
gggtttcttgctgaggtagaggcgattattcgcatggttccgaagagtcggcagacgatg
ttgttctcggcgacaatgccggataacgtgaagcggctggcaaggacttacatggaccgt
ccccgggatattcggattgcggaaacctcccgcattactttggacagcatccggcaaatt
gttgtggagtgcacggaccggggcaaacaaggtgcgctgatcgagatgatccgaagtcat
cgtccttacttggcggtcattttctgtcggacgaagcggcgcgccagcaagctgaatgag
gctctgcaggaggcaggttttgcttcggacgagctgcacggcgatttgtctcaatcaaag
cgggaacaggttatgcgcgcgtttcgagatgcgaagctggagctcctcgtggcgacggat
gtcgcggcacgcgggatcgacgtagaaggcgtaacccatgtatttaactacgatatccct
caggatgtggatagttatattcaccggatcggccgtaccgggcgagctggtgagaaagga
atagccataacctttgcctctccaagagatatcgatgcgctgcgaaacattgagcgaggt
attggtttgaagctggagcggcagcgccaggataagagtggggcggccgtcgtcgtgaag
gagcagacgacggggaagcgggaatccagggacggagctggaaggggaagaaggacggag
ggcaggaagacggcaaacgggaaaacgaatggaggccgacgagggggcgcggaaagtgct
agtggctgggggcgtggagcctcttcgtccggtcgagcccggggtggaaggaatgcccat
gcaagaggcgggtctgctggttcttccccgcgtggagacggcgggggaagacgcggcgga
agagaacgcggtggacggcggggccgctaa
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