KEGG   Paenibacillus lentus: EIM92_08165
Entry
EIM92_08165       CDS       T05914                                 
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
plen  Paenibacillus lentus
Brite
KEGG Orthology (KO) [BR:plen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:plen03021]
    EIM92_08165
Transcription machinery [BR:plen03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EIM92_08165
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r4_2 Sigma70_r3 Sigma70_r2 HTH_23 GerE HTH_Tnp_ISL3 HTH_38 HTH_50 Sigma70_ECF KORA HTH_28 HTH_10 HTH_29 HTH_24 MarR_2 TnsD MarR DUF1492 Phage_antitermQ HTH_31 HTH_7 Hydrolase CENP-B_N
Other DBs
NCBI-ProteinID: AZK46171
UniProt: A0A3S8RT55
LinkDB
Position
1860760..1861533
AA seq 257 aa
MSDKLTPPESLNESTSLIWQYQQTKDNEIATALIQKYEPMVKVAAGKIARNRPDLYEDLY
QVGQMALIRLLQQYDIELGIPFEPYAMKSMIGHMKNFLRDKSWYIQVPRRIKEKGALVQQ
AIDELTVRLERSPDVKEIAEYLDLSVEETVEVLAGRECYHYVSLDSPLSQDETAATLGEL
ISSEANDYDTVEKRMDLQQALSQLKEQEQQVLLLAFQEGQSQRAIAQQLGVSQMSVSRIQ
KRATEKLKQIMANSNLY
NT seq 774 nt   +upstreamnt  +downstreamnt
atgagcgacaaattgactccccccgagtctttgaatgaatcaaccagcctgatctggcaa
tatcagcaaacgaaggacaacgaaattgctactgctctcattcagaaatatgagccgatg
gtcaaggtggctgcaggtaaaatcgcccgcaatcgacctgatttatacgaggacttgtat
caggtaggccaaatggcgctgatccggttgctgcagcaatacgatatcgagctgggtata
ccatttgagccatatgctatgaagagcatgatcgggcatatgaagaactttctgcgggac
aagtcctggtatatccaggtgccgcgccgcattaaggagaagggagcacttgtccagcag
gctattgatgaattgacagtgagattggaacgttcccccgatgtgaaggagatcgccgaa
tacttggatctttcggtggaggaaacggtcgaagtgcttgcgggtcgagaatgttatcac
tatgtatctctcgattctccgctgtctcaagatgaaaccgcggcaacgcttggtgaatta
attagttctgaagctaatgattatgatactgtggagaagcgaatggatttacagcaagcg
cttagccagttaaaggaacaggagcagcaggttctattgctggcctttcaagaggggcaa
tctcagcgtgccatcgctcagcagctgggggtatcgcaaatgagtgtttcccggatacaa
aaacgagcgaccgaaaagctgaagcagattatggcaaactctaatttatattaa

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