Paenibacillus lentus: EIM92_17000
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Entry
EIM92_17000 CDS
T05914
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
plen
Paenibacillus lentus
Pathway
plen02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
plen00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EIM92_17000 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plen03021
]
EIM92_17000 (rpoD)
Transcription machinery [BR:
plen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EIM92_17000 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
HTH_10
Exonuc_VII_L
KORA
tify
Motif
Other DBs
NCBI-ProteinID:
AZK47634
UniProt:
A0A3Q8SCR7
LinkDB
All DBs
Position
complement(3780954..3781850)
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AA seq
298 aa
AA seq
DB search
MTEDLKLHTESEYTDDLTLPPGIKIDDPVRMYLKEIGRVPLLSAEEEIELAKRIEQGDEE
AKRRLAEANLRLVVSIARRYVGRGMVFLDLIQEGNMGLIKAVEKFDFKKGFKFSTYATWW
IRQAITRAIADQARTIRIPVHMVETINKLIRISRQLLQEIGREPTPEEIAKEMELTPEKV
REIMKIAQEPVSLETPIGEENDSNLGDFIEDHDALAPAEAAAYELLKEQLEEVLDTLTER
EENVLRLRFGMDDGRTRTLEEVGKEFGVTRERIRQIEAKALRKLRHPSRSKRLKDFME
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgacagaggatttgaagcttcatactgaatcagaatatacagatgacctgacgttaccg
ccaggtataaagattgatgatcctgtacgcatgtacttgaaggagattggcagggttccg
ctattgtcagcggaggaagaaatcgaactggccaagcgaatagagcaaggagacgaggaa
gccaaacgcagactggcagaagctaatctgcgactcgttgtaagtattgcccgccgttat
gtaggtaggggaatggtgttcctggacctgattcaggaagggaacatgggactcataaaa
gccgtggagaaatttgatttcaaaaaaggctttaagtttagtacgtatgccacatggtgg
atacgtcaggctataactagagcgatagccgaccaggccagaacgatacgtattccggtt
catatggtagaaacgattaacaagctgatccgcatttcacgtcagcttcttcaggaaatc
ggccgagagccgactccggaggaaattgccaaggaaatggagttgacgccggaaaaagtt
cgtgaaattatgaagatcgcccaagagccggtatctttggaaacccccattggggaagag
aatgactctaacttaggcgatttcattgaggatcacgacgcattggctccagcggaagcc
gcggcgtacgagctgctgaaggagcagctcgaggaagtgcttgatacgctgactgagcgg
gaggaaaacgtacttcgcttgcgcttcggaatggatgacggacggacgcggacacttgaa
gaggtgggtaaagagtttggtgttacccgggaacggatcagacaaattgaagctaaggct
cttcgcaagctgaggcatccaagccgcagcaaacgtttgaaggattttatggaataa
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