KEGG   Paenibacillus lentus: EIM92_17545
Entry
EIM92_17545       CDS       T05914                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
plen  Paenibacillus lentus
Pathway
plen03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:plen00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EIM92_17545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plen03019]
    EIM92_17545
Messenger RNA biogenesis [BR:plen03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EIM92_17545
SSDB
Motif
Pfam: RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Lactamase_B_6
Other DBs
NCBI-ProteinID: AZK47737
UniProt: A0A3S8RXV2
LinkDB
Position
complement(3899418..3901097)
AA seq 559 aa
MSKKMNNDKLTIFALGGVAEIGKNMYVVQYANDIVVIDAGLKFPEEDMLGIDIVIPDITY
LTENRDKVRGIVLTHGHEDHIGGLPYVLKNLNVPVYGTKLTLGLVENKLKEAGLLGDTKR
VLIHADSEIQLGSTLKATFFKTNHSIPDSVGVCIETPEGNVVHTGDFKFDHTPVNDQFAD
LHRMGEIGKKGVLALLSDSTNAEKPGFTPSEKNVGIVLDDIFRKAQQRVVVATFASNVHR
IQQVIDATYSTDRKLTIIGRSMVNVVTIAAELGYLNVPDGILIDPDEVNKMAADRVVILC
TGSQGEPMSALTRMARSTHRKVDILPGDTVIIAATPVPGNEKYVGRTIDELFRLGAEVIY
SGSNSGVHVSGHGSQEELKLMLNLMRPKYFIPVHGEYRMLRKHALLGESVGIDPDNIFLL
DIGEMVEIQNGAARKAGKVPAGNVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQ
DGTIVSGPDIISRGFVYVRESEGLLEEANRIVSSTLEKLMSENVNEWASLKTNVKDSLGR
FLYEQTRRRPMILPIIMEV
NT seq 1680 nt   +upstreamnt  +downstreamnt
ttgtccaaaaaaatgaataatgataaattgacgatctttgcattgggcggcgtagcggaa
atcggaaagaacatgtacgtcgttcaatatgccaatgacatcgttgtaattgatgctggc
cttaaatttccagaagaggacatgcttggcattgatatcgtcattcccgatatcacttac
ttgacagagaatcgtgacaaagtaaggggcatcgtgcttacgcacggccacgaagaccat
atcggtggattgccatatgtactcaaaaacttaaatgttcctgtctacggaacgaaattg
acgctggggctggttgagaacaaattaaaggaagccggtttgcttggggatacgaagcgt
gtactcattcatgcggattcggagattcagttaggctcgacgctaaaagcgacattcttt
aaaacaaaccacagtattcctgattcggttggggtgtgcatcgaaacgccggaaggaaac
gtagttcatacgggtgacttcaaatttgaccatactccagttaatgatcagtttgctgat
ttgcaccggatgggggaaatcgggaagaaaggggtactggcgctattatcggatagtacg
aatgccgagaagcctgggttcacaccatcagagaaaaatgttggaatcgtattggatgat
attttccggaaggctcagcagcgcgttgttgttgctacattcgcctccaatgtacaccga
attcaacaagtgatcgatgcaacctactcgacagatcgcaaactcacgattattggtcgc
agtatggttaacgtcgtgacgattgctgcagaacttggctacttgaacgttccggatggt
atcttaatcgatccggacgaagtgaacaaaatggcggcggatcgtgttgtcatactctgc
acaggcagtcaaggcgagccgatgtcagccttaactcgtatggctcggtcaactcaccgt
aaggtggatattctgcctggagatacagtcatcatcgcggcgacgccagtgcctggtaac
gaaaaatacgtaggacgcacgattgatgaattattccgtctcggcgccgaggtaatttat
agcggttctaattcaggagttcacgtctccgggcatggcagccaggaagaattgaaattg
atgttgaatttgatgcgtcctaaatatttcatccctgttcacggggagtatcgaatgctg
cggaagcatgctctactcggtgaatccgtcggaattgatccggataacatcttcttgctt
gacatcggcgaaatggtagaaattcagaatggcgcagctcgcaaagcgggtaaagtacca
gctggcaatgtgctaattgacgggcttggagtcggtgacgttgggaatatcgtgcttcgt
gaccgtaagctgttgtctcaagatggcattcttgttgtcgttgtcacgctgagcaaacaa
gatggaacaatcgtttctggaccagacattatatccagaggcttcgtatacgttagagag
tcggaaggccttcttgaagaagcaaatcgaattgtatccagcacattggagaagttaatg
agcgaaaatgtgaatgaatgggcttcgctgaagacgaacgtgaaggattcgttaggacgt
ttcctttacgaacaaacacggcgcagaccgatgattcttcccatcattatggaagtgtga

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