Paenibacillus lentus: EIM92_17900
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Entry
EIM92_17900 CDS
T05914
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
plen
Paenibacillus lentus
Brite
KEGG Orthology (KO) [BR:
plen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plen03032
]
EIM92_17900 (topA)
03400 DNA repair and recombination proteins [BR:
plen03400
]
EIM92_17900 (topA)
Enzymes [BR:
plen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EIM92_17900 (topA)
DNA replication proteins [BR:
plen03032
]
Prokaryotic type
DNA Topoisomerases
EIM92_17900 (topA)
DNA repair and recombination proteins [BR:
plen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EIM92_17900 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Auto_anti-p27
Zn_ribbon_RPB9
Toprim_3
Lar_restr_allev
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
AZK47804
UniProt:
A0A3S8RY13
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All DBs
Position
complement(3970181..3972280)
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AA seq
699 aa
AA seq
DB search
MADSLVIVESPAKAKTIGKYLGSKYIVKASMGHVRDLPKSQIGVEVENDFSPKYITIRGK
GSVLKELKDASKKVKKIYLAADPDREGEAIAWHLAHALDMDETESCRVVFNEITKQAVKD
AFKTPRKINMDLVNAQQARRILDRLVGYKISPLLWKKVKKGLSAGRVQSVAVKIIMDREN
EISAFVPEEYWSITAKLKTGDSSFEAKFHQLRGEKLELTNEEQVNGILKSIKDAQFKVTD
VKERERLRHPAAPFTTSSLQQEAARKLNFRAAKTMSVAQQLYEGVDLGKEGTVGLITYMR
TDSTRIAESAQMEAKEYIVAKYGEKFVPESPRQYSKKAAGSQDAHEAIRPTSALRDPESV
KPFMSRDQYRLYKLIWERFMASQMASAVLDTLSVDIAAGDATFRAVGSKIRFHGFMKVYV
EGNDDGTTDDDKYLPPLHVGDELKTENIEPKQHFTQPPPRYTEARLVKTLEELGIGRPST
YAPTLETIQKRGYVAIEDKKFMPTELGELVIEQMEQFFPEILDVEFTAHMEDDLDHVEEG
SEDWVRVLSDFYESFEKRLEVAEEEMKEIEIEDEVSDEICEKCGKPLVYKLGRFGKFLAC
SGFPDCRNTKPIVKDIGVTCPTCKEGHVVERRSKKGRVFFGCNRYPECDFVSWDRPSAKP
CPKCGGLLVEKRNKQGGKLQCKACDHVEQIEENEDTSDE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtggcggattcactcgtcatcgtggaatcgcctgccaaggcgaaaacgattggcaaatac
ttaggcagtaaatacatcgtgaaagcttcaatggggcatgttcgtgatttgcccaagagc
cagattggggttgaggtagaaaatgacttcagtccgaagtatataacaatccgtggtaag
ggttctgtattgaaggaattgaaggatgccagcaaaaaggtaaagaaaatttatctcgca
gctgaccccgatcgcgagggagaagcgattgcttggcatttggcccatgcgcttgatatg
gatgaaacggaatcttgtcgcgtcgtattcaacgagattacgaagcaagcggtcaaggat
gcgtttaagacaccgcgcaaaatcaatatggatctcgtgaatgcccaacaagcccggcgg
attcttgatcggctggttggttataagattagtcccttactatggaaaaaagttaaaaaa
ggtttgtcggcgggaagagttcagtcggttgctgtaaaaattattatggatcgggagaac
gaaatttccgcatttgttccggaagagtattggagcatcacagctaagcttaagacggga
gattcatcatttgaagcgaaatttcatcaattacgtggtgagaagctggagctgacgaat
gaggaacaggtaaacgggatattaaaatccattaaagatgcacaattcaaggttaccgat
gttaaggagagggaacgacttcgtcatccagccgcaccatttacgacgagctcgttgcag
caagaggcggcccgaaagctgaatttccgtgcggcaaagaccatgtcggttgctcagcag
ctgtatgaaggcgtagatctaggcaaagagggaactgtaggtctgattacttatatgcgt
acggattctacgcgtattgccgaatcggcgcaaatggaagcgaaggaatacatcgttgct
aaatatggtgaaaaattcgtaccggaatcaccacggcaatattcgaagaaagcggcgggc
tctcaggatgcacatgaagcgatccgccctacctcggcgttacgcgatccagaatctgtg
aaaccctttatgagccgggatcagtatcgtttatataaattgatttgggaacgctttatg
gctagccagatggcttcggcggtgctggatactttatcagtggatatcgcagctggggac
gctacgttccgtgcagtcggctctaaaatccgttttcacggctttatgaaggtgtatgta
gaggggaacgacgatggaacgacggatgatgataaatatttgccgccgctccatgtcggt
gatgaactgaagacggagaatattgaaccgaagcagcatttcactcagccgccgccgaga
tatacggaagcccgtttggtcaaaacgttggaggaactgggcataggacgccctagtacg
tatgcccctacacttgagacgattcagaagcgtggctacgtggcgattgaagataagaaa
ttcatgccgaccgagctcggtgagcttgtcattgagcagatggagcagttttttccagaa
attttagatgttgagtttactgctcatatggaagatgatcttgatcatgtcgaggaaggc
tcggaagactgggttcgcgttctgagcgatttttatgaatcgtttgagaaacgcttggaa
gttgctgaagaagagatgaaggaaatcgaaatcgaagatgaggtttccgatgaaatttgt
gaaaaatgcggcaagccgctcgtatataaattagggcgattcggtaagttccttgcatgc
tccggattcccggactgccgtaatacgaagcccatcgtcaaggacatcggcgtgacctgt
cctacgtgtaaggaagggcatgtcgttgaacgacgcagcaagaaaggaagagtattcttc
ggatgcaatcgttatcccgaatgcgactttgtgtcatgggatcggccgtcagcgaagcca
tgtcctaaatgtggaggactgctcgtagagaagcgtaataagcaaggtggcaagctgcaa
tgcaaagcctgcgaccatgtggaacaaatcgaggagaatgaggatacctccgatgaataa
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