Paenibacillus lentus: EIM92_19615
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Entry
EIM92_19615 CDS
T05914
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
plen
Paenibacillus lentus
Pathway
plen03030
DNA replication
plen03430
Mismatch repair
plen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EIM92_19615
03430 Mismatch repair
EIM92_19615
03440 Homologous recombination
EIM92_19615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plen03032
]
EIM92_19615
03400 DNA repair and recombination proteins [BR:
plen03400
]
EIM92_19615
Enzymes [BR:
plen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EIM92_19615
DNA replication proteins [BR:
plen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EIM92_19615
DNA repair and recombination proteins [BR:
plen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EIM92_19615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
Herpeto_peptide
Motif
Other DBs
NCBI-ProteinID:
AZK48105
UniProt:
A0A3Q8SDE0
LinkDB
All DBs
Position
complement(4325648..4329484)
Genome browser
AA seq
1278 aa
AA seq
DB search
MDEFVHLHVHSEYSLLDGAARLQDLVAKAASFGMKALALTDHGVMYGAVPFYKYCKANGI
KPIIGCEMYFTAASRKERGTRKDQPIHHLILLAKNETGYRNLMRLSSIGHLEGFHYKPRI
DWEVLERHSEGLVCLSACLGGEVPQHLLHGRYNEARKAAQRYQAVFGEDFYIELQDHGIP
EQKKVLPELIKLARELDVQLVATNDVHYLNQEDAEVQDVLICIGTGKTVEDEERLQIPTD
QLYLKSGAEMAALFPYISEAVTNTKVIADKCNLELEFGRHILPAYRPIPDGMSAEAYLTM
LCEEGLEKRYGHLDIWQQEHTREPLKQRLYYELNVIGNMGFSDYFLIVWDFIAYAHRQGI
ATGPGRGSSAGSIVAYVLNITDVDPMKYNLLFERFLNPERVTMPDIDIDFSDERRDEVIA
YVADKYGAEHVAQIITFGTMAARAAVRDVGRVLNVPFGEVDKVAKLIPGNLGMTIERAIQ
ESPELKGLYESQQRIQGLLDMARKVEGMPRHASTHAAGVVISRDPLTDTVPLQAGGEGTP
LTQYSMEHLESIGLLKMDFLGLRTLSIIERCMNWIQEQEGETPDFRHIPDNDPATYEMLG
RGETTGVFQLESAGMRRVLRELKPSVFEDIITVLALYRPGPMEFIPKYIAGKHGQISVEY
PHADLIPILQDTYGIIVYQEQIMQIAAKMAGFSLGEADLLRRAVSKKKREVLDEERGHFV
AGSLAKGYEEKDANAVYDMIVRFANYGFPRAHAAAYGVLAFQTAYLKAHYPVHFMASMLT
AVMGSHRKVAEYIIECRRMGITVLPPDVNESSILFTPRLVQTSDRKNAEHNIGATEPLTV
VESYAANDLQELGGSEPVNMMAERAAVLSGAPVEEKSRHSEDAEVAVRGVIRFGLAAIKN
VGTQAMESILRERKERPFDSLLDFCRRVDLRTCNKRVIESLIQGGAFDSLPGHRAQLLAM
LDETVEAALKWRKEREDLQIQLFDFVETPNWNIEYPEIPPFSAAQQLDLERELLGLYLSG
HPLDDYDELLVAEGSERLMDLGESPDGSRVVVAGMVVSVKTITTKQGKAMAFMELEDQVE
RCEVVLFPEIWRRSGELVAKGALLALRATVQQQDEGFKLLADELAPLSAASLAQLRRSRG
ASPRGMGRASAQPQPAAPRGNDAVTAASSRTAAAQRSEAPGAAGSAGQPFERAATAAREV
KTPAQRVFIKIPAAAENARLLEQLKSLLQLHPGSVATLLYYESTGKLLALSERYNIKPSP
ELFQQMEDMLGRGTVKIK
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatttgttcacttgcacgtgcatagcgagtacagtctgctggatggtgccgcc
agactacaggatttggttgccaaagcggcaagcttcggaatgaaggcgttggcgttaacc
gaccatggagtcatgtacggggcggttcctttttataaatattgcaaggcaaacggcatt
aagccgattattggctgtgaaatgtactttacggccgcttcgcgcaaggaacggggaact
cgcaaagaccagccgattcatcatttgattttgctggccaagaatgaaacgggttaccgg
aatctcatgaggctgtcttccattggccatctagagggctttcactataagccgcggatc
gattgggaggtgctggagcgacacagcgaaggtctcgtatgcctgagcgcctgtcttggc
ggcgaggtgccgcagcatttgctgcacggcagatataacgaggctcgaaaggctgcacag
cgctaccaggcggtattcggtgaggatttctatatcgagcttcaggatcatggtattcca
gaacaaaaaaaggtgcttccggagctgatcaagctggctcgcgagctggatgtgcaactg
gtggcaacgaatgatgtacattatttgaaccaagaggatgccgaggtacaggatgtactc
atctgcatcggtacaggcaagacggtagaggatgaggaacggctgcaaattccaaccgat
cagctgtatttaaaaagcggcgcagaaatggcggcgctattcccatatatttctgaggcc
gttactaatacgaaggttattgcggacaaatgtaatcttgagcttgaattcggacggcat
attttaccggcctatcgcccgattccggatggaatgagcgctgaagcctatttgaccatg
ttatgtgaagaagggcttgagaaaagatatggccatcttgacatttggcagcaggagcat
acccgtgagccattgaaacagcggctttattatgaattgaatgtcatcggaaatatgggt
ttctcggattattttttgatcgtttgggatttcatcgcttacgcgcacaggcagggtatt
gccaccggtccgggacggggctcctctgcggggagcatcgtggcttatgtgctgaatatt
accgatgtcgatccgatgaaatacaatttgctgtttgagcgcttccttaaccctgaacgg
gtgaccatgccggacatcgatatcgatttcagcgatgagcggcgggatgaggttattgct
tatgttgcggacaaatacggcgctgagcatgtggcgcaaattattacgttcggtaccatg
gccgcgcgtgctgcggtgcgggatgtgggacgtgtgctaaacgtgccgtttggcgaagtg
gataaggtggcgaagctgatccctggcaatctcggtatgacgattgagcgggcgatccag
gaaagcccggagctgaaggggctctacgaatcacagcagcggattcaaggcttgctcgac
atggctcgcaaggtagaaggcatgccccgtcatgcgtctactcatgcagccggcgttgtg
atttcccgcgatccgctgacggacactgtgccgctgcaggctggcggcgaagggacaccg
cttacccagtattccatggagcatctggagtcgatagggctgctcaaaatggacttcttg
ggactgcgtacgctctcgattatcgagcgttgtatgaactggattcaggagcaggaggga
gaaacccctgattttcgccatattccggataatgacccagccacctatgagatgctggga
aggggcgagacaacgggcgtattccagttggaatccgcagggatgaggcgggtgcttagg
gagctgaagccctctgttttcgaggatattattacggttctcgctctgtatcggcctggt
ccgatggaatttattccaaaatatatcgcaggcaagcacgggcagattagcgtggaatat
ccgcatgctgacctgattccgattcttcaggacacctacggcatcatcgtttatcaggaa
caaattatgcagatcgcggcaaagatggcgggcttttctctgggcgaagccgatttgctg
cgccgcgccgtttcgaagaagaaacgcgaggtactggatgaagagagagggcattttgta
gctggaagtctagccaaaggatatgaagagaaagatgcgaatgcggtttacgatatgatc
gttcgcttcgccaattatgggtttcctcgcgctcatgccgcggcgtacggagttcttgct
tttcaaacggcctatttgaaggcgcattatcctgttcactttatggcgtcgatgctgacg
gctgtgatgggcagccatcgcaaggtggctgaatacattatcgaatgtcgccgaatgggg
attacggtattgccgccggatgttaatgagagcagtatcttgtttacgcctcgtctagtt
cagacttccgatagaaaaaatgcggagcataacatcggggctactgagccgcttacagtc
gtagaatcgtatgcggcaaacgatttgcaggagctgggcgggagcgaaccggtaaacatg
atggcagagcgggctgcggtactttctggggcgccggtagaagagaaaagcagacactcc
gaagatgctgaggtggctgtgcggggcgttatccgcttcggcctggcggcgattaagaat
gtcggtactcaggctatggagagtattttgcgggaacggaaggaaaggccctttgatagc
ttactcgatttttgcaggcgggttgatttgcggacttgcaataaacgggttattgaatcg
cttattcaaggcggcgcgtttgattcgctgccgggtcatcgtgcacaattgctcgccatg
ctggacgagacggttgaggctgcactcaaatggcgcaaggagcgggaggatttgcaaata
cagttatttgattttgtggagacgccgaactggaatatcgagtatccagaaatccctccg
tttagtgcggcgcagcagctggatctggagcgggagctgttaggcttgtatctgtccggt
catccgctcgatgattacgacgaattgctggtggccgaaggaagcgaaagacttatggat
ctaggggagagtccagatgggagcagggttgtcgtcgctggtatggtcgtgtctgtaaag
acaatcacgaccaagcagggcaaagcgatggcctttatggaactggaggatcaggtagag
cgatgtgaggtcgtattatttcctgaaatatggcggcgcagcggggaattggtcgccaaa
ggcgccctgctggcgctgcgcgccaccgtccagcagcaggacgaaggcttcaagctgctg
gcggacgagcttgcgccgctaagcgccgcgagcctcgcgcagcttcggcgcagccgcggg
gcatccccccgcggcatgggcagggcctcggcgcagccgcagcctgcagccccgcgtggg
aatgacgccgtcacggcggcgtcatcccgcacggctgcagcgcagcgcagcgaggcccct
ggggctgccggcagcgccgggcagccctttgagcgggcggcgacggccgcccgcgaggtg
aagacgcccgcgcagcgcgtcttcatcaagatcccggcggcggcggagaacgcccgcctg
ctggagcagctgaagtcgctgcttcagcttcatccaggctctgtcgctacgttgctctat
tatgagagcactggcaagctgctcgcactaagcgagcgctacaacattaagccatcacct
gagctgtttcagcagatggaagatatgctggggagagggacagtgaagattaaataa
DBGET
integrated database retrieval system
