Paenibacillus lentus: EIM92_20410
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Entry
EIM92_20410 CDS
T05914
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
plen
Paenibacillus lentus
Pathway
plen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EIM92_20410 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plen03019
]
EIM92_20410 (recQ)
03400 DNA repair and recombination proteins [BR:
plen03400
]
EIM92_20410 (recQ)
Enzymes [BR:
plen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EIM92_20410 (recQ)
Messenger RNA biogenesis [BR:
plen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EIM92_20410 (recQ)
DNA repair and recombination proteins [BR:
plen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EIM92_20410 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AZK48243
UniProt:
A0A3Q8S657
LinkDB
All DBs
Position
complement(4495093..4496928)
Genome browser
AA seq
611 aa
AA seq
DB search
MNMQSTLMEQAKSYLQKYYGYPDFREGQRKIVESVLSGADTLGIMPTGGGKSICYQIPAL
MLPGLTLVVSPLISLMKDQVDALTTAGVSAAYINSTLSGKEVNDRIRAARRGDLKLLYVA
PERLELDWFREEMGSLTISCVAVDEAHCVSQWGHDFRTSYLAVAPFVNGLPNRPIVAAFT
ATATPEVMDDMTRLLQLREPEIFVTGLGRDNLAMSVLRGENKREFVLNYAKTHGHQPGIV
YAATRKEVDDLYERLKQNGIPAGRYHAGLSDKERDGSQEAFLYDDIRVMVATNAFGMGID
KSNVRYVIHYNMPKNMEAYVQEAGRAGRDGEPSECILLFSPQDIMTQKFLIEQNPQDDGR
KRNEYRKLQQMIEYCYSTSCLRWGMLDYFGEKHDRKPCGICSSCTDERELVDMTRDAQIV
FSCIHRMRERFGVTMVASVLKGSRNKKVLQYGFDSLPTYGMMPRRTEKEISELINVFIAE
GYLALSEGQYPVVRLQPLAVDVLKGQHQVMMREPEPVATQTAGSSRRRRGAYDDGPSAVN
ETIFEQLRLIRRDLAEKERVPSYIIFNDATLREMSIVCPTSEADMLNIKGVGEVKYRKYG
QAFLEFFKNME
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgcaatccactttaatggaacaagccaaatcttatttgcaaaaatattacggc
tacccagatttccgggaaggccagcgaaaaatcgtagagagtgtcttgtccggcgccgac
acgcttggcatcatgccgacaggcggcgggaagtccatctgctaccagattcccgcgctt
atgctgcccggacttacactagttgtgtcgccgctgatctcactcatgaaggaccaggtg
gacgcgctcacgactgccggagtatccgcggcctatattaatagcacgttgtccggcaag
gaagtgaatgatcgcattcgcgcagcaagaaggggcgaccttaagctgttgtatgtcgcg
ccggaacggctggagctcgactggttccgtgaggaaatgggcagcctgacgatttcctgc
gtcgccgttgatgaggcccactgcgtatcgcagtggggccatgatttccgcacgagctac
ctcgcggtagccccgttcgtgaatgggctgccaaacaggccgattgtcgcggcctttacg
gcaacggccacgccggaggtcatggatgacatgacacggctgcttcagctccgtgaacca
gagatatttgtcactggacttggccgcgacaatttggcaatgtctgtgctgcgcggcgag
aacaagcgcgagttcgtactgaactacgcgaagacgcacggacatcagccgggcatcgtt
tatgcagcgacccgcaaggaggtcgacgatttgtacgagcggctcaagcagaatggcatt
ccggccggaaggtatcatgctgggctatccgacaaagagcgggatgggagccaggaggcc
tttctctatgatgatattcgcgtgatggtcgcgacgaatgcttttggcatgggaatcgac
aagtccaacgtccgttacgtgattcactataatatgccgaaaaatatggaagcttatgtg
caggaggccggacgtgcagggcgggacggagagccgagtgagtgtattctgctattcagc
ccgcaggacatcatgacgcagaaatttctgattgagcagaacccgcaggacgatggacgc
aagcgcaacgaataccgcaagctgcagcagatgattgaatactgctactcgaccagttgt
ttgcgttgggggatgctcgactacttcggagagaagcacgaccgcaagccctgcggtatt
tgtagctcttgcaccgatgagcgcgaattagtggatatgacccgggatgctcaaattgtg
ttctcttgcatccatcggatgagagagcgcttcggcgtcacgatggtcgcttcggtgctc
aagggctcccgcaataagaaggtgctccaatacggcttcgatagcttgcctacgtatggc
atgatgccaaggcgcaccgagaaggagatctccgaactgatcaatgtatttatagctgaa
gggtacctcgccctttccgaaggacaatatccggttgtccggctgcagcctttagcagtt
gacgtgctgaaggggcagcatcaggtgatgatgcgcgaacctgagccggtggcgacccag
actgcggggagcagccgtcgccgcagaggggcttacgacgatggaccgtctgccgtcaac
gagacgatattcgagcagcttcgccttattcgccgtgacttggcggagaaggagcgtgtg
ccgtcctacattatttttaacgatgcgactcttcgcgaaatgagtatcgtttgtccgacg
agcgaagcggatatgctgaatattaaaggggtaggggaagtgaagtaccgtaaatacgga
caggcattcctcgagttttttaaaaatatggaatag
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