Pleomorphomonas sp. SM30: OHA_1_00138
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Entry
OHA_1_00138 CDS
T05766
Symbol
rhlE_1
Name
(GenBank) ATP-dependent RNA helicase RhlE
Organism
pleo
Pleomorphomonas sp. SM30
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_19
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBE70574
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Position
1:complement(147066..148667)
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AA seq
533 aa
AA seq
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MQFSELGLSDKVLAAVEAAGYTQPTPIQEQAIPHALTGRDIIGIAQTGTGKTAGFVLPMM
TLLEKGRARARMPRTLILEPTRELAAQVEENFNKYGINQKLTVALLIGGVSFDDQDRKLD
RGVDVLIATPGRLLDHFERGKLLLNGVEILVIDEADRMLDMGFIPDIERICKLITKKHQT
LFFSATMPPEIQRITDSFLTDPVKIEVAKPATTAKTVAQRLATAGVEAHEKRDVLRGLIR
DAEDLKNAIVFCNRKRDVAIVYRSLERHGFNVGALHGDMDQSARMATLAAFRKGTLTLLV
ASDVAARGLDIPEVSHVFNFDVPIHAEDYVHRIGRTGRAGRTGTAITIVTPDDGKFLGAI
EKLIGEDLEWLGDEVTFDPEGARKRRARGKTGEDRERGGSRARGRGESRSEPRGEDGERR
PRRAAGERPARSADEARAPRGAEEARPPRAPAEPRAPRAAAESRPVRAGDDVAPIRQEEP
RAPRRDDRRDERGPRPERGRHHRDHDDGPAVVGLGDHVPAFLLRPVRTVKQAS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttccgaactcggcctgagcgacaaggtgttggcggccgtcgaggcggcaggc
tacacgcagccgactccgatccaggagcaggcgatcccgcacgcgctcaccggccgcgac
atcatcggcatcgcccagaccggcaccggcaagacggcgggcttcgtcctgccgatgatg
acgctgctcgagaagggccgcgcccgggcgcggatgccgcgcacgctgatcctcgagccg
acgcgcgaactcgccgcgcaggtcgaggagaacttcaacaagtacggcatcaaccagaag
ctcacggtcgcgctgctgatcggcggcgtctccttcgacgaccaggaccgcaagctcgac
cgcggcgtcgacgtgctgatcgccacgcccggccgcctgctcgaccacttcgagcgcggc
aagctgctgctgaacggcgtcgagatcctcgtcatcgacgaggccgaccgcatgctcgac
atgggcttcatcccggacatcgagcgcatctgcaagctgatcaccaagaagcaccagacg
ctgttcttctccgcgaccatgccgccggagatccagcgcatcaccgacagcttcctgacc
gacccggtcaagatcgaggtcgccaagccggcgaccaccgccaagacggtggcgcagcgc
ctcgccaccgccggcgtcgaggcccacgagaagcgcgacgtgctgcgcggcctgatccgc
gacgccgaggacctcaagaacgcgatcgtgttctgcaaccgcaagcgcgacgtcgccatc
gtctaccgcagcctggagcgccacggcttcaacgtcggcgccctgcacggcgacatggac
cagtccgcccgcatggcgacgctggccgccttccgcaagggcacgctgacgctgctggtc
gccagcgacgttgccgcccgcggcctcgacatccccgaggtcagccacgtcttcaacttc
gacgtgccgatccacgccgaggactacgtccaccgcatcggccgcaccggtcgtgccggc
cgcaccggcaccgcgatcaccatcgtgacgcccgacgacggcaagttcctcggcgccatc
gagaagctgatcggcgaggatctggagtggctcggcgacgaggtcaccttcgatcccgag
ggcgcccgcaagcgccgcgcccgcggcaagaccggcgaggaccgcgagcgcggcggctcg
cgcgcccgcggccgcggcgagtcccgttccgaaccgcgcggcgaggacggcgagcgccgg
ccgcgtcgcgccgccggcgagcgtccggcccgttccgccgacgaggcccgcgcgccccgc
ggcgccgaggaggcccggccgccccgcgccccggccgagccccgcgccccgcgtgccgcg
gcggagtcccgccccgtgcgcgccggcgacgacgtcgccccgatccgccaggaggagccg
cgcgccccgcgccgcgacgatcgtcgcgacgaacgtggcccgcgccccgagcgcggccgt
caccaccgcgaccacgacgacggccccgccgtcgtcggcctcggcgaccacgtcccggcc
ttcctgctgcgcccggtccgcaccgtcaagcaggcgtcctga
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