Pleomorphomonas sp. SM30: OHA_1_00741
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Entry
OHA_1_00741 CDS
T05766
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pleo
Pleomorphomonas sp. SM30
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleo03019
]
OHA_1_00741 (rnc)
03009 Ribosome biogenesis [BR:
pleo03009
]
OHA_1_00741 (rnc)
03036 Chromosome and associated proteins [BR:
pleo03036
]
OHA_1_00741 (rnc)
Enzymes [BR:
pleo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
OHA_1_00741 (rnc)
Messenger RNA biogenesis [BR:
pleo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OHA_1_00741 (rnc)
Ribosome biogenesis [BR:
pleo03009
]
Eukaryotic type
90S particles
RNase
OHA_1_00741 (rnc)
Prokaryotic type
rRNA processing factors
OHA_1_00741 (rnc)
Chromosome and associated proteins [BR:
pleo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
OHA_1_00741 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BBE71171
LinkDB
All DBs
Position
1:796109..796819
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AA seq
236 aa
AA seq
DB search
MAKVVQTIRPLDAVAERLGHVFANRESLSRALTHRSAVPGDRAAHESYQRHEFLGDRVLA
LVVADMLYKAHPRADEGDLARRLNQLVRRETCAEVAAELGLGEAIRLGTGERQSGGRQKE
AILGDVAEAVIAAIYLDGGFEAARAFVERHWRPRMEGLSGPLRDAKTMLQEWAQGRGLPT
PVYEAIDRSGPDHAPEFTVRVTVGSGPAGEGRGKSKRDAEQAAAQGVLVREGLWSS
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggtcgtccagaccatccgtccgctggacgcggtggccgagcgcctcgggcac
gtcttcgccaatcgcgagagcctgtcgcgcgcgctgacccaccgcagcgccgtgccgggc
gaccgtgccgcccacgagagctaccagcgtcacgagttcctcggcgaccgggtgctggcg
ctcgtggtcgccgacatgctctacaaggcgcatccgcgggccgacgagggcgatctcgcc
cgccgcctcaaccagctggtccgccgcgagacctgtgccgaggtcgccgccgagctcggg
ctcggcgaggcgatccggctcggcaccggcgagcgccagtcgggcgggcggcagaaggag
gcgatcctcggcgacgtcgccgaagcggtgatcgccgcgatctacctcgacggcggcttc
gaggcggcgcgcgccttcgtcgagcggcactggcgaccgcgcatggagggcctgtccggc
cccttgcgcgacgccaagaccatgctgcaggaatgggcgcaggggcgcggcctgccgacg
cccgtctacgaggcgatcgaccggtcgggccccgaccacgcgccggaattcaccgtgcgg
gtgacggtcggcagcggtccggcgggcgaggggcgcggcaagtccaagcgcgacgccgag
caggccgcggcacagggcgtcctcgtccgcgagggactttggagttcatga
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